BLASTX nr result
ID: Coptis23_contig00029418
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029418 (316 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN72964.1| hypothetical protein VITISV_016492 [Vitis vinifera] 83 2e-14 ref|XP_003633217.1| PREDICTED: uncharacterized protein LOC100852... 81 8e-14 emb|CBI17874.3| unnamed protein product [Vitis vinifera] 74 9e-12 ref|XP_003610003.1| Lysine-specific demethylase NO66 [Medicago t... 69 5e-10 ref|XP_002325235.1| predicted protein [Populus trichocarpa] gi|2... 68 9e-10 >emb|CAN72964.1| hypothetical protein VITISV_016492 [Vitis vinifera] Length = 590 Score = 83.2 bits (204), Expect = 2e-14 Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 1/103 (0%) Frame = +3 Query: 3 SPFVLRKLLEPLSGPQDSLNSFIQSFN-SKGIHDVLSSTIEGLVSCPPLPSDELDILNFL 179 SP ++R L + L+ D +SF+Q N K + +S ++GLVSC P+ SDEL+ILNFL Sbjct: 321 SPLLVRSLSKGLNEQDDVFSSFVQYLNLKKTVSSFVSPLLQGLVSCLPIDSDELNILNFL 380 Query: 180 KENKDGLGHQIIYGQDIRVVKAVERSLGTSRGNLKTEVHFLKE 308 K ++ LG IIYGQDIRV++ + G+LK EVHF +E Sbjct: 381 KTVRNELGCLIIYGQDIRVLRTM--------GHLKEEVHFFQE 415 >ref|XP_003633217.1| PREDICTED: uncharacterized protein LOC100852762 [Vitis vinifera] Length = 564 Score = 81.3 bits (199), Expect = 8e-14 Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 1/103 (0%) Frame = +3 Query: 3 SPFVLRKLLEPLSGPQDSLNSFIQSFN-SKGIHDVLSSTIEGLVSCPPLPSDELDILNFL 179 SP ++R L + L+ D +SFIQ N K + + ++GLVSC P+ SDEL+ILNFL Sbjct: 94 SPLLVRSLSKGLNEQDDVFSSFIQYLNLKKTVSSFVLPLLQGLVSCLPIDSDELNILNFL 153 Query: 180 KENKDGLGHQIIYGQDIRVVKAVERSLGTSRGNLKTEVHFLKE 308 K ++ LG IIYGQDIRV++ + G+LK EVHF +E Sbjct: 154 KTVRNELGCLIIYGQDIRVLRTM--------GHLKEEVHFFQE 188 >emb|CBI17874.3| unnamed protein product [Vitis vinifera] Length = 770 Score = 74.3 bits (181), Expect = 9e-12 Identities = 46/102 (45%), Positives = 63/102 (61%), Gaps = 2/102 (1%) Frame = +3 Query: 3 SPFVLRKLLEPLSGPQDSLNSFIQSFN-SKGIHDVLSSTIEGLVSCPPLPSDELDILNFL 179 SP ++R L + L+ D +SFIQ N K + + ++GLVSC P+ SDEL+ILNFL Sbjct: 313 SPLLVRSLSKGLNEQDDVFSSFIQYLNLKKTVSSFVLPLLQGLVSCLPIDSDELNILNFL 372 Query: 180 KENKDGLGHQIIYGQDIRVVKAVERSLGTSRGNLKTEV-HFL 302 K ++ LG IIYGQDIRV++ + G+LK E HFL Sbjct: 373 KTVRNELGCLIIYGQDIRVLRTM--------GHLKEEAPHFL 406 >ref|XP_003610003.1| Lysine-specific demethylase NO66 [Medicago truncatula] gi|355511058|gb|AES92200.1| Lysine-specific demethylase NO66 [Medicago truncatula] Length = 784 Score = 68.6 bits (166), Expect = 5e-10 Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 1/86 (1%) Frame = +3 Query: 3 SPFVLRKLLEPLSGPQDSLNSFIQSFNSKG-IHDVLSSTIEGLVSCPPLPSDELDILNFL 179 SPF+L + E D + FIQS N G + +L S ++ LVSC P+ S+E +ILNFL Sbjct: 323 SPFLLSRTSED-HNVNDMFSPFIQSLNWNGSVPSLLHSILQDLVSCFPIASEEQNILNFL 381 Query: 180 KENKDGLGHQIIYGQDIRVVKAVERS 257 E KD LG IIY QDIRVVKA +S Sbjct: 382 IEVKDRLGCPIIYQQDIRVVKADSQS 407 >ref|XP_002325235.1| predicted protein [Populus trichocarpa] gi|222866669|gb|EEF03800.1| predicted protein [Populus trichocarpa] Length = 764 Score = 67.8 bits (164), Expect = 9e-10 Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 1/103 (0%) Frame = +3 Query: 3 SPFVLRKLLEPLSGPQDSLNSFIQSFNSKG-IHDVLSSTIEGLVSCPPLPSDELDILNFL 179 SP ++R+L L+ D L+SF +S N K ++S ++ +SC P+ SDEL+I++FL Sbjct: 293 SPSLVRRLSGSLTEENDILSSFAESLNCKEPCPTFVASILQSFISCVPIASDELNIISFL 352 Query: 180 KENKDGLGHQIIYGQDIRVVKAVERSLGTSRGNLKTEVHFLKE 308 +E + LG IIY QDIRV++ + S K EVHF ++ Sbjct: 353 EEVRSELGCPIIYDQDIRVLRTEQPS--------KKEVHFFQK 387