BLASTX nr result

ID: Coptis23_contig00029418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029418
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72964.1| hypothetical protein VITISV_016492 [Vitis vinifera]    83   2e-14
ref|XP_003633217.1| PREDICTED: uncharacterized protein LOC100852...    81   8e-14
emb|CBI17874.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_003610003.1| Lysine-specific demethylase NO66 [Medicago t...    69   5e-10
ref|XP_002325235.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10

>emb|CAN72964.1| hypothetical protein VITISV_016492 [Vitis vinifera]
          Length = 590

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   SPFVLRKLLEPLSGPQDSLNSFIQSFN-SKGIHDVLSSTIEGLVSCPPLPSDELDILNFL 179
           SP ++R L + L+   D  +SF+Q  N  K +   +S  ++GLVSC P+ SDEL+ILNFL
Sbjct: 321 SPLLVRSLSKGLNEQDDVFSSFVQYLNLKKTVSSFVSPLLQGLVSCLPIDSDELNILNFL 380

Query: 180 KENKDGLGHQIIYGQDIRVVKAVERSLGTSRGNLKTEVHFLKE 308
           K  ++ LG  IIYGQDIRV++ +        G+LK EVHF +E
Sbjct: 381 KTVRNELGCLIIYGQDIRVLRTM--------GHLKEEVHFFQE 415


>ref|XP_003633217.1| PREDICTED: uncharacterized protein LOC100852762 [Vitis vinifera]
          Length = 564

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   SPFVLRKLLEPLSGPQDSLNSFIQSFN-SKGIHDVLSSTIEGLVSCPPLPSDELDILNFL 179
           SP ++R L + L+   D  +SFIQ  N  K +   +   ++GLVSC P+ SDEL+ILNFL
Sbjct: 94  SPLLVRSLSKGLNEQDDVFSSFIQYLNLKKTVSSFVLPLLQGLVSCLPIDSDELNILNFL 153

Query: 180 KENKDGLGHQIIYGQDIRVVKAVERSLGTSRGNLKTEVHFLKE 308
           K  ++ LG  IIYGQDIRV++ +        G+LK EVHF +E
Sbjct: 154 KTVRNELGCLIIYGQDIRVLRTM--------GHLKEEVHFFQE 188


>emb|CBI17874.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/102 (45%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3   SPFVLRKLLEPLSGPQDSLNSFIQSFN-SKGIHDVLSSTIEGLVSCPPLPSDELDILNFL 179
           SP ++R L + L+   D  +SFIQ  N  K +   +   ++GLVSC P+ SDEL+ILNFL
Sbjct: 313 SPLLVRSLSKGLNEQDDVFSSFIQYLNLKKTVSSFVLPLLQGLVSCLPIDSDELNILNFL 372

Query: 180 KENKDGLGHQIIYGQDIRVVKAVERSLGTSRGNLKTEV-HFL 302
           K  ++ LG  IIYGQDIRV++ +        G+LK E  HFL
Sbjct: 373 KTVRNELGCLIIYGQDIRVLRTM--------GHLKEEAPHFL 406


>ref|XP_003610003.1| Lysine-specific demethylase NO66 [Medicago truncatula]
           gi|355511058|gb|AES92200.1| Lysine-specific demethylase
           NO66 [Medicago truncatula]
          Length = 784

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   SPFVLRKLLEPLSGPQDSLNSFIQSFNSKG-IHDVLSSTIEGLVSCPPLPSDELDILNFL 179
           SPF+L +  E      D  + FIQS N  G +  +L S ++ LVSC P+ S+E +ILNFL
Sbjct: 323 SPFLLSRTSED-HNVNDMFSPFIQSLNWNGSVPSLLHSILQDLVSCFPIASEEQNILNFL 381

Query: 180 KENKDGLGHQIIYGQDIRVVKAVERS 257
            E KD LG  IIY QDIRVVKA  +S
Sbjct: 382 IEVKDRLGCPIIYQQDIRVVKADSQS 407


>ref|XP_002325235.1| predicted protein [Populus trichocarpa] gi|222866669|gb|EEF03800.1|
           predicted protein [Populus trichocarpa]
          Length = 764

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   SPFVLRKLLEPLSGPQDSLNSFIQSFNSKG-IHDVLSSTIEGLVSCPPLPSDELDILNFL 179
           SP ++R+L   L+   D L+SF +S N K      ++S ++  +SC P+ SDEL+I++FL
Sbjct: 293 SPSLVRRLSGSLTEENDILSSFAESLNCKEPCPTFVASILQSFISCVPIASDELNIISFL 352

Query: 180 KENKDGLGHQIIYGQDIRVVKAVERSLGTSRGNLKTEVHFLKE 308
           +E +  LG  IIY QDIRV++  + S        K EVHF ++
Sbjct: 353 EEVRSELGCPIIYDQDIRVLRTEQPS--------KKEVHFFQK 387


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