BLASTX nr result

ID: Coptis23_contig00029411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029411
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34939.3| unnamed protein product [Vitis vinifera]              205   9e-51
ref|XP_002278851.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   205   9e-51
ref|XP_003530872.1| PREDICTED: uncharacterized protein LOC100783...   172   6e-41
ref|XP_003551415.1| PREDICTED: uncharacterized protein LOC100783...   170   4e-40
ref|XP_002522371.1| mRNA, complete cds, clone: rafl24-09-C04, pu...   170   4e-40

>emb|CBI34939.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score =  205 bits (522), Expect = 9e-51
 Identities = 105/184 (57%), Positives = 127/184 (69%), Gaps = 4/184 (2%)
 Frame = -1

Query: 822 RLQIILDTWIQWESVPSPADVSKKEGIDFPWCKGRKQWPIRIGCVDPKDPLPKFSMLTMC 643
           RL+IIL+ WIQ   VPSPA+VSK+EGI FPW KGR+ WPIRIGC+DPK  LPK SML M 
Sbjct: 376 RLEIILNMWIQLGYVPSPAEVSKEEGISFPWSKGRELWPIRIGCLDPKGRLPKLSMLMMQ 435

Query: 642 SLRSEDPYFICMETARDL----QKGVLLSFREGAGTTDIIMGLLQACHIRKALLLRRKNW 475
           SL SED YFICME  R L    Q+G+LL  REGA TTD+I GLLQAC++RK LLL R  W
Sbjct: 436 SLSSEDFYFICMEACRRLTRPEQQGILLCLREGASTTDVISGLLQACYVRKKLLLNRTRW 495

Query: 474 EQTQEADDISDSAVSEWLDLVVDSSKRCAGWKGTLLKKLESAGWALKNILLSVHEQVRYR 295
           +   E  D SD+ V EW  +V DS +        L +++   GW +KNILLS  EQV+YR
Sbjct: 496 KNIVEDCDTSDTFVREWFKVVEDSKQSAQRDLNLLNEEMLRLGWTVKNILLSAEEQVKYR 555

Query: 294 LLDE 283
            +D+
Sbjct: 556 FVDD 559


>ref|XP_002278851.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
          Length = 514

 Score =  205 bits (522), Expect = 9e-51
 Identities = 105/184 (57%), Positives = 127/184 (69%), Gaps = 4/184 (2%)
 Frame = -1

Query: 822 RLQIILDTWIQWESVPSPADVSKKEGIDFPWCKGRKQWPIRIGCVDPKDPLPKFSMLTMC 643
           RL+IIL+ WIQ   VPSPA+VSK+EGI FPW KGR+ WPIRIGC+DPK  LPK SML M 
Sbjct: 331 RLEIILNMWIQLGYVPSPAEVSKEEGISFPWSKGRELWPIRIGCLDPKGRLPKLSMLMMQ 390

Query: 642 SLRSEDPYFICMETARDL----QKGVLLSFREGAGTTDIIMGLLQACHIRKALLLRRKNW 475
           SL SED YFICME  R L    Q+G+LL  REGA TTD+I GLLQAC++RK LLL R  W
Sbjct: 391 SLSSEDFYFICMEACRRLTRPEQQGILLCLREGASTTDVISGLLQACYVRKKLLLNRTRW 450

Query: 474 EQTQEADDISDSAVSEWLDLVVDSSKRCAGWKGTLLKKLESAGWALKNILLSVHEQVRYR 295
           +   E  D SD+ V EW  +V DS +        L +++   GW +KNILLS  EQV+YR
Sbjct: 451 KNIVEDCDTSDTFVREWFKVVEDSKQSAQRDLNLLNEEMLRLGWTVKNILLSAEEQVKYR 510

Query: 294 LLDE 283
            +D+
Sbjct: 511 FVDD 514


>ref|XP_003530872.1| PREDICTED: uncharacterized protein LOC100783222 [Glycine max]
          Length = 513

 Score =  172 bits (437), Expect = 6e-41
 Identities = 89/179 (49%), Positives = 116/179 (64%), Gaps = 4/179 (2%)
 Frame = -1

Query: 822 RLQIILDTWIQWESVPSPADVSKKEGIDFPWCKGRKQWPIRIGCVDPKDPLPKFSMLTMC 643
           RL+IIL TWI+   VPSPA+VS+KEGI+F   KG+  WPIRIGC++PKD +PK+SM T+ 
Sbjct: 330 RLEIILSTWIECGYVPSPAEVSEKEGINFLGVKGKSLWPIRIGCLNPKDQVPKWSMKTIQ 389

Query: 642 SLRSEDPYFICMETARDLQK----GVLLSFREGAGTTDIIMGLLQACHIRKALLLRRKNW 475
            +  ED YF+C E    L++     +LLS REGA    IIMGLLQAC+IRKALLL    W
Sbjct: 390 CITDEDYYFVCAEIFDGLRRTGKPSILLSIREGAKAVHIIMGLLQACYIRKALLLNSTRW 449

Query: 474 EQTQEADDISDSAVSEWLDLVVDSSKRCAGWKGTLLKKLESAGWALKNILLSVHEQVRY 298
           E   E    SDS + +W  +V D+ +        L++++   GW +KNILLS  EQ RY
Sbjct: 450 EIIIEESHASDSTMEDWSVIVEDAKRSTERDMSNLIEQMVGKGWMVKNILLSTQEQTRY 508


>ref|XP_003551415.1| PREDICTED: uncharacterized protein LOC100783455 [Glycine max]
          Length = 525

 Score =  170 bits (430), Expect = 4e-40
 Identities = 88/183 (48%), Positives = 117/183 (63%), Gaps = 5/183 (2%)
 Frame = -1

Query: 822 RLQIILDTWIQWESVPSPADVSKKEGIDFPWCKGRK-QWPIRIGCVDPKDPLPKFSMLTM 646
           RL+IIL TWI+   VPSPA+VS+KEGI+F   KG K  WPIRIGC++PKD +PK+SM T+
Sbjct: 341 RLEIILSTWIECGYVPSPAEVSEKEGINFLGVKGGKCLWPIRIGCLNPKDQIPKWSMKTI 400

Query: 645 CSLRSEDPYFICMETARDLQK----GVLLSFREGAGTTDIIMGLLQACHIRKALLLRRKN 478
             +  ED YF+C+E    L++     +LLS REGA    IIMG+LQAC+IR+ALL+    
Sbjct: 401 QCITDEDYYFVCVEIFEGLKRIGKPSILLSIREGAEAVHIIMGMLQACYIRRALLMNNTR 460

Query: 477 WEQTQEADDISDSAVSEWLDLVVDSSKRCAGWKGTLLKKLESAGWALKNILLSVHEQVRY 298
           WE   E    SDS + +W  +V D+ K        L++++   GW  KNILLS  EQ RY
Sbjct: 461 WEIIIEESHASDSTMEDWFVIVEDAKKSAERDTSNLIEQMVGKGWMAKNILLSTQEQTRY 520

Query: 297 RLL 289
             +
Sbjct: 521 SFI 523


>ref|XP_002522371.1| mRNA, complete cds, clone: rafl24-09-C04, putative [Ricinus
           communis] gi|223538449|gb|EEF40055.1| mRNA, complete
           cds, clone: rafl24-09-C04, putative [Ricinus communis]
          Length = 523

 Score =  170 bits (430), Expect = 4e-40
 Identities = 92/185 (49%), Positives = 121/185 (65%), Gaps = 5/185 (2%)
 Frame = -1

Query: 822 RLQIILDTWIQWESVPSPADVSKKEGIDFPWCKGRKQWPIRIGCVDPKDPLPKFSMLTMC 643
           RL++ILD+WI    VP+PA+VSKKEG +F   KG++ WPIRIGC++ KD + K S++ M 
Sbjct: 344 RLEMILDSWIALGRVPTPAEVSKKEGFEFLRTKGKELWPIRIGCLNAKDQISKLSVIAMQ 403

Query: 642 SLRSEDPYFICMETA-----RDLQKGVLLSFREGAGTTDIIMGLLQACHIRKALLLRRKN 478
           SL SED YFIC+E +     R  Q+G+LLS REGAGT D+IMGLLQAC+IRKALL  R  
Sbjct: 404 SLSSEDYYFICVENSYRGLTRTKQQGILLSLREGAGTADVIMGLLQACYIRKALLFSR-- 461

Query: 477 WEQTQEADDISDSAVSEWLDLVVDSSKRCAGWKGTLLKKLESAGWALKNILLSVHEQVRY 298
           WE      D   +   E + L+ DS +        L  ++ + GWA+KNILLS  EQ RY
Sbjct: 462 WE---TISDPGSTVHKECIKLIEDSKQSAEKDLSMLGDQMTALGWAVKNILLSTEEQTRY 518

Query: 297 RLLDE 283
             +D+
Sbjct: 519 SFVDD 523


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