BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029408
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...   167   2e-39
ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]...   162   9e-38
gb|AEG64816.1| RING-H2 type zinc finger [Avicennia marina]            155   1e-35
ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|2...   153   3e-35
ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...   150   3e-34

>ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Vitis vinifera]
           gi|296081356|emb|CBI16789.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  167 bits (424), Expect = 2e-39
 Identities = 86/148 (58%), Positives = 106/148 (71%), Gaps = 3/148 (2%)
 Frame = +2

Query: 131 MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVMGCAENTSDFEADTSIEG---C 301
           MGLS++ S AEG+LPVLVMNTV+SVA++KNMVR VLQVMG   ++ + E D S E     
Sbjct: 1   MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYSPM 60

Query: 302 AESLRKRRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPKMECCVCLHKFEAHEEVSE 481
           +E+ ++RR+S T FKSL            S   G+ + WC  M+CCVCL +FEA EEVSE
Sbjct: 61  SENAKERRVSVTQFKSL------------SHSSGTGTGWCSSMDCCVCLCRFEAEEEVSE 108

Query: 482 LSCKHFFHKGCLEKWLDHKHSTCPLCRS 565
           LSCKHFFHKGC EKW D+KHS+CPLCRS
Sbjct: 109 LSCKHFFHKGCWEKWFDNKHSSCPLCRS 136


>ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]
           gi|355490951|gb|AES72154.1| RING-H2 finger protein
           [Medicago truncatula]
          Length = 151

 Score =  162 bits (409), Expect = 9e-38
 Identities = 82/154 (53%), Positives = 108/154 (70%), Gaps = 9/154 (5%)
 Frame = +2

Query: 131 MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVMGCAENTSDFEADTSIEGCAE- 307
           MGLS++P AAEG++PV+VMNTV+S+ ++KNM R +LQV+GC   T+   +   +E   E 
Sbjct: 1   MGLSNFPYAAEGVVPVIVMNTVLSMVLLKNMFRSMLQVVGCTSTTNSSYSPNIMEELEEE 60

Query: 308 --------SLRKRRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPKMECCVCLHKFEA 463
                   + R+RR+S T +K LC N S I ARS+S    SC    P +ECCVCL  FEA
Sbjct: 61  QVYSQEISNSRERRVSITQYKFLCYNRSNI-ARSSS----SCGWTSPMVECCVCLSGFEA 115

Query: 464 HEEVSELSCKHFFHKGCLEKWLDHKHSTCPLCRS 565
           ++EVSEL CKHFFH+GCL+KW D+KHS+CPLCRS
Sbjct: 116 NQEVSELPCKHFFHRGCLDKWFDNKHSSCPLCRS 149


>gb|AEG64816.1| RING-H2 type zinc finger [Avicennia marina]
          Length = 150

 Score =  155 bits (391), Expect = 1e-35
 Identities = 80/148 (54%), Positives = 100/148 (67%), Gaps = 3/148 (2%)
 Frame = +2

Query: 131 MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVMGCAENTSDFEADTSI-EGCAE 307
           MGLS++ S AEG+L +LVMNTV+SVAI+KN +R VLQV+G     SD E +    E  + 
Sbjct: 1   MGLSNFSSPAEGVLHLLVMNTVMSVAIVKNKLRSVLQVVGAGGGDSDQEFEEEYGEDESG 60

Query: 308 SLRKRRISSTLFKSLCNNGSRIGARSASGDQ--GSCSHWCPKMECCVCLHKFEAHEEVSE 481
             R RR+S T + SLC +      R   G    G   +W P +ECCVCL +FEA EEVSE
Sbjct: 61  GSRTRRVSVTRYGSLCRDRCGCSPRERGGSTAAGDGGYWPPAVECCVCLSRFEADEEVSE 120

Query: 482 LSCKHFFHKGCLEKWLDHKHSTCPLCRS 565
           LSCKHFFHKGCL+KW D+++ TCPLCRS
Sbjct: 121 LSCKHFFHKGCLDKWFDNQNITCPLCRS 148


>ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|222863634|gb|EEF00765.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  153 bits (387), Expect = 3e-35
 Identities = 85/146 (58%), Positives = 103/146 (70%), Gaps = 1/146 (0%)
 Frame = +2

Query: 131 MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQ-VMGCAENTSDFEADTSIEGCAE 307
           MGLS +P AAEG+LPVLVMNTV+SVA++K+MVR VLQ V+G      D+E +   E   E
Sbjct: 1   MGLSSFPGAAEGVLPVLVMNTVLSVALLKSMVRSVLQLVVGANWTPPDYEEEPD-EYRRE 59

Query: 308 SLRKRRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPKMECCVCLHKFEAHEEVSELS 487
           + R+RRIS T FKSL  N    GAR+++            MECCVCL  FEA EEVSELS
Sbjct: 60  NARERRISITQFKSLNQNDG--GARNSA------------MECCVCLCGFEAEEEVSELS 105

Query: 488 CKHFFHKGCLEKWLDHKHSTCPLCRS 565
           CKHFFH+GCL+KW D+ H+TCPLCRS
Sbjct: 106 CKHFFHRGCLDKWFDNIHATCPLCRS 131


>ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
          Length = 134

 Score =  150 bits (379), Expect = 3e-34
 Identities = 79/148 (53%), Positives = 106/148 (71%), Gaps = 3/148 (2%)
 Frame = +2

Query: 131 MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVM---GCAENTSDFEADTSIEGC 301
           MGLS++PSA+EG+LPVLV+NTV+SVA++KNM R +LQV+     A N S+ E D S    
Sbjct: 1   MGLSNFPSASEGVLPVLVINTVLSVAVLKNMFRSMLQVVLGGSAAANGSNIEHDES---- 56

Query: 302 AESLRKRRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPKMECCVCLHKFEAHEEVSE 481
           + S  +RR+S T +KSLC++   IG  S +            +ECCVCL +FEA++EVSE
Sbjct: 57  SSSSWERRVSITQYKSLCHSHD-IGGTSMA-----------MVECCVCLCRFEANQEVSE 104

Query: 482 LSCKHFFHKGCLEKWLDHKHSTCPLCRS 565
           L CKH+FH+GCL+KW D+KH+TCPLCRS
Sbjct: 105 LPCKHYFHRGCLDKWFDNKHTTCPLCRS 132