BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029393
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632856.1| PREDICTED: transcription factor bHLH87-like ...   120   1e-25
ref|XP_002299748.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002515900.1| DNA binding protein, putative [Ricinus commu...   110   2e-22
emb|CAN65002.1| hypothetical protein VITISV_023488 [Vitis vinifera]    88   6e-16
gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [L...    86   2e-15

>ref|XP_003632856.1| PREDICTED: transcription factor bHLH87-like [Vitis vinifera]
          Length = 471

 Score =  120 bits (301), Expect = 1e-25
 Identities = 63/128 (49%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
 Frame = -2

Query: 376 TDTSAEDDGISMLFSDCRNLWNFNTSGAISSGESENNG---TKDEDNDACRQVKNPVEMA 206
           T+TS EDDGIS++FSDCRNLWNF +  A+SSG+SENNG    K E   A  ++   V   
Sbjct: 180 TETSIEDDGISVIFSDCRNLWNFGSGSAVSSGDSENNGFNTRKKEMRCAVNELDETVSQG 239

Query: 205 SKDYSPFKHVKSSDTRPSSSKRNKEREETKTAANYPYFDLFQSNSSTTEGGFQLISENRS 26
           + D      +  S+T+P+S+KR+ ++ E K + NY  FDL QS++ T +GGF+LISEN  
Sbjct: 240 ASDRLANPGI-CSETKPNSTKRSCDQNELKVSPNYHCFDLLQSDACTPDGGFRLISENSP 298

Query: 25  KVKKPRLE 2
           K KKPR E
Sbjct: 299 KPKKPRAE 306


>ref|XP_002299748.1| predicted protein [Populus trichocarpa] gi|222847006|gb|EEE84553.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  111 bits (278), Expect = 5e-23
 Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 7/130 (5%)
 Frame = -2

Query: 376 TDTSAEDDGISMLFSDCRNLWNF--NTSGAISSGESENN----GTKDEDNDACRQVKNPV 215
           TDTS EDDGISM+FSDCRNLWNF  N+S A+SSGESENN    G K+         +   
Sbjct: 13  TDTSVEDDGISMIFSDCRNLWNFAPNSSAAVSSGESENNTCNPGNKEMHCPVSELDETVS 72

Query: 214 EMASKDYSPFKHVKSSDTRPSSSKRNKER-EETKTAANYPYFDLFQSNSSTTEGGFQLIS 38
             +S  Y   K+   S T+P S+KR+ +   E K    +P+FD+ QS  S  EGGF+LIS
Sbjct: 73  HCSSDQYG--KNRDCSQTKPVSTKRSNDHCSELKMGLKHPFFDILQSECSNQEGGFRLIS 130

Query: 37  ENRSKVKKPR 8
           +N  K KKPR
Sbjct: 131 DNPPKSKKPR 140


>ref|XP_002515900.1| DNA binding protein, putative [Ricinus communis]
           gi|223544805|gb|EEF46320.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 395

 Score =  110 bits (274), Expect = 2e-22
 Identities = 63/123 (51%), Positives = 80/123 (65%)
 Frame = -2

Query: 376 TDTSAEDDGISMLFSDCRNLWNFNTSGAISSGESENNGTKDEDNDACRQVKNPVEMASKD 197
           TDTS EDDGISM+FSDCRNLWNF+ + A SSGESENN      N   +++  P E  S+ 
Sbjct: 112 TDTSVEDDGISMIFSDCRNLWNFSANSAASSGESENN----TSNARNKEMHCPDETVSQS 167

Query: 196 YSPFKHVKSSDTRPSSSKRNKEREETKTAANYPYFDLFQSNSSTTEGGFQLISENRSKVK 17
            S  K   S  ++P S+KR+ ++ E K       FDL Q+NS TT+GGF+LISEN SK K
Sbjct: 168 ISSDKKC-SQTSKPVSTKRSNDQTELKA----DIFDLLQTNSCTTQGGFRLISENPSKSK 222

Query: 16  KPR 8
           + R
Sbjct: 223 RLR 225


>emb|CAN65002.1| hypothetical protein VITISV_023488 [Vitis vinifera]
          Length = 447

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
 Frame = -2

Query: 331 DCR-NLWNFNTSGAISSGESENNG---TKDEDNDACRQVKNPVEMASKDYSPFKHVKSSD 164
           DC  NLWNF +  A+SSG+SENNG    K E   A  ++   +   S D      +   +
Sbjct: 170 DCLLNLWNFGSGSAVSSGDSENNGFNTRKKEMRCAVNELDETISQGSSDRLANPGI-CPE 228

Query: 163 TRPSSSKRNKEREETKTAANYPYFDLFQSNSSTTEGGFQLISENRSKVKKPRLE 2
           T+P+S KR+ ++ E K + NY  FDL QS++ T +GGF+LISEN  K KKPR E
Sbjct: 229 TKPNSMKRSCDQNELKVSPNYHCFDLLQSDACTPDGGFRLISENSPKPKKPRSE 282


>gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
          Length = 495

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 57/129 (44%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
 Frame = -2

Query: 376 TDTSAEDDGISMLFSDCRNLWNF-NTSGAISSGESE---NNGTKDEDNDACRQVKNPVEM 209
           TDTS EDDGISM+  DC NLWNF + S A SSGESE   +NGTK++  +   QV  PV+ 
Sbjct: 219 TDTSVEDDGISMILPDCGNLWNFSHGSAAASSGESETNASNGTKNKHMEF--QVNEPVQT 276

Query: 208 ASKDYSPFKHVKSSDTRPSSSKRNKEREETKTAANYPYFDLFQSNSSTTEGGFQLISENR 29
            S+               SSS + K +     +++  YF + +  +S  EGGF+LISEN 
Sbjct: 277 VSQ---------------SSSDQLKPKRRNNQSSDDQYFTMLE--NSPIEGGFRLISENP 319

Query: 28  SKVKKPRLE 2
            K KKPR E
Sbjct: 320 PKCKKPRWE 328