BLASTX nr result

ID: Coptis23_contig00029387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029387
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270022.1| PREDICTED: putative acyl-CoA synthetase YngI...   100   5e-27
gb|AFD33353.1| acyl-activating enzyme 9 [Cannabis sativa]             102   7e-26
emb|CBI38405.3| unnamed protein product [Vitis vinifera]              100   6e-25
ref|XP_003631909.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain...   100   6e-25
ref|XP_002307787.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-25

>ref|XP_002270022.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
          Length = 566

 Score = 99.8 bits (247), Expect(2) = 5e-27
 Identities = 48/59 (81%), Positives = 51/59 (86%)
 Frame = -2

Query: 330 LTQLGISYGDVVAVLAPNTPAMYELHFAVPMAGAILCTSNIRHDSAMVSVLLSHSEAKV 154
           +T LGIS GDVVA LAPN PAMYELHF VPMAGA+LCT NIRHDSAMVS LL HSEAK+
Sbjct: 65  ITHLGISRGDVVAALAPNIPAMYELHFGVPMAGAVLCTLNIRHDSAMVSTLLKHSEAKM 123



 Score = 46.2 bits (108), Expect(2) = 5e-27
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = -3

Query: 152 FVDYKFVEVARGALDLLYLTKTKLPRLVLVPTSQIPSHTVSIS 24
           FVDY+ ++ A+GAL++L  T+TKLPRLVL+P       T+S S
Sbjct: 125 FVDYQLLDTAQGALEILSKTRTKLPRLVLIPECDKLQPTISNS 167


>gb|AFD33353.1| acyl-activating enzyme 9 [Cannabis sativa]
          Length = 561

 Score =  102 bits (253), Expect(2) = 7e-26
 Identities = 51/60 (85%), Positives = 53/60 (88%)
 Frame = -2

Query: 330 LTQLGISYGDVVAVLAPNTPAMYELHFAVPMAGAILCTSNIRHDSAMVSVLLSHSEAKVF 151
           ++ LGIS G VVAVLAPN PAMYELHF VPMAGAILCT NIRHDSAMVSVLL HSEAKVF
Sbjct: 56  ISHLGISSGHVVAVLAPNIPAMYELHFGVPMAGAILCTLNIRHDSAMVSVLLRHSEAKVF 115



 Score = 40.0 bits (92), Expect(2) = 7e-26
 Identities = 19/46 (41%), Positives = 30/46 (65%)
 Frame = -3

Query: 152 FVDYKFVEVARGALDLLYLTKTKLPRLVLVPTSQIPSHTVSISSTN 15
           FVDY+F+ +A+GA+D+L    +K P LVL+P       +  ISS++
Sbjct: 116 FVDYQFLHIAQGAIDMLSKKGSKPPLLVLIPECDDDQLSTDISSSS 161


>emb|CBI38405.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  100 bits (250), Expect(2) = 6e-25
 Identities = 49/59 (83%), Positives = 52/59 (88%)
 Frame = -2

Query: 330 LTQLGISYGDVVAVLAPNTPAMYELHFAVPMAGAILCTSNIRHDSAMVSVLLSHSEAKV 154
           LTQLGIS GDVVAVLAPN PAMYELHF VPMAGA+LCT N RH+SAMVS LL HSEAK+
Sbjct: 100 LTQLGISRGDVVAVLAPNVPAMYELHFGVPMAGAVLCTLNTRHNSAMVSTLLRHSEAKI 158



 Score = 38.1 bits (87), Expect(2) = 6e-25
 Identities = 23/50 (46%), Positives = 30/50 (60%)
 Frame = -3

Query: 152 FVDYKFVEVARGALDLLYLTKTKLPRLVLVPTSQIPSHTVSISSTNFNSS 3
           FVDY+ +E+A  ALDLL  T+TK P LVL+  S           TNF++S
Sbjct: 160 FVDYQLLEIAHVALDLLKKTETKPPILVLIVESD------GSPPTNFSTS 203


>ref|XP_003631909.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
           ligase-like [Vitis vinifera]
          Length = 419

 Score =  100 bits (250), Expect(2) = 6e-25
 Identities = 49/59 (83%), Positives = 52/59 (88%)
 Frame = -2

Query: 330 LTQLGISYGDVVAVLAPNTPAMYELHFAVPMAGAILCTSNIRHDSAMVSVLLSHSEAKV 154
           LTQLGIS GDVVAVLAPN PAMYELHF VPMAGA+LCT N RH+SAMVS LL HSEAK+
Sbjct: 100 LTQLGISRGDVVAVLAPNVPAMYELHFGVPMAGAVLCTLNTRHNSAMVSTLLRHSEAKI 158



 Score = 38.1 bits (87), Expect(2) = 6e-25
 Identities = 23/50 (46%), Positives = 30/50 (60%)
 Frame = -3

Query: 152 FVDYKFVEVARGALDLLYLTKTKLPRLVLVPTSQIPSHTVSISSTNFNSS 3
           FVDY+ +E+A  ALDLL  T+TK P LVL+  S           TNF++S
Sbjct: 160 FVDYQLLEIAHVALDLLKKTETKPPILVLIVESD------GSPPTNFSTS 203


>ref|XP_002307787.1| predicted protein [Populus trichocarpa] gi|222857236|gb|EEE94783.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score = 98.2 bits (243), Expect(2) = 8e-25
 Identities = 47/59 (79%), Positives = 51/59 (86%)
 Frame = -2

Query: 330 LTQLGISYGDVVAVLAPNTPAMYELHFAVPMAGAILCTSNIRHDSAMVSVLLSHSEAKV 154
           L  LGIS GDVVA LAPN PAMYELHF VPMAGA+LCT N+RHDS+MVSVLL HSEAK+
Sbjct: 56  LAHLGISPGDVVAALAPNIPAMYELHFGVPMAGAVLCTLNVRHDSSMVSVLLKHSEAKL 114



 Score = 40.4 bits (93), Expect(2) = 8e-25
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = -3

Query: 152 FVDYKFVEVARGALDLLYLTKTKLPRLVLVPTSQIPS 42
           FVDY+ + +A+GAL++L   KTKLP LVL+P    P+
Sbjct: 116 FVDYQCLPIAQGALEILSERKTKLPLLVLIPECGQPA 152


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