BLASTX nr result

ID: Coptis23_contig00029377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029377
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM11099.1| ABC protein [Coptis japonica]                         144   6e-33
emb|CBI37062.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_002515185.1| multidrug resistance protein 1, 2, putative ...   144   1e-32
ref|XP_002273987.1| PREDICTED: ABC transporter B family member 1...   144   1e-32
emb|CAN76787.1| hypothetical protein VITISV_029557 [Vitis vinifera]   144   1e-32

>dbj|BAM11099.1| ABC protein [Coptis japonica]
          Length = 1288

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/92 (73%), Positives = 83/92 (90%)
 Frame = -2

Query: 276 KVTLRFVYAGIGAAVASFFQMSCWMVTGERQSVRLRNMYLKAVLRQDITFFDMETDMGEV 97
           KV+LRFVY GIG+A A+FFQ++CW +TGERQS R+R++YLKA+LRQDITFFD ET+ GEV
Sbjct: 117 KVSLRFVYLGIGSAAAAFFQLACWKITGERQSARIRHLYLKAILRQDITFFDKETNTGEV 176

Query: 96  VGRMSGDLVLIQDAMGEKVGKSIQLISAFLGG 1
           VGR+SG +VLIQDAMGEKVGK +QL S+FLGG
Sbjct: 177 VGRVSGGVVLIQDAMGEKVGKFVQLGSSFLGG 208


>emb|CBI37062.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  144 bits (362), Expect = 1e-32
 Identities = 64/92 (69%), Positives = 81/92 (88%)
 Frame = -2

Query: 276 KVTLRFVYAGIGAAVASFFQMSCWMVTGERQSVRLRNMYLKAVLRQDITFFDMETDMGEV 97
           KV+L+FVY  +GA +A+FFQ++CWMVTGERQ+ R+R++YLK +LRQD+ FFD ET+ GEV
Sbjct: 113 KVSLKFVYLAVGAGIAAFFQVACWMVTGERQAARIRSLYLKTILRQDVAFFDKETNTGEV 172

Query: 96  VGRMSGDLVLIQDAMGEKVGKSIQLISAFLGG 1
           +GRMSGD VLIQDAMGEKVGK IQL+S F+GG
Sbjct: 173 IGRMSGDTVLIQDAMGEKVGKFIQLVSTFIGG 204


>ref|XP_002515185.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223545665|gb|EEF47169.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1292

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/92 (72%), Positives = 80/92 (86%)
 Frame = -2

Query: 276 KVTLRFVYAGIGAAVASFFQMSCWMVTGERQSVRLRNMYLKAVLRQDITFFDMETDMGEV 97
           KV+L+FVY GIG++VASF Q+ CWMVTGERQ+ R+R +YLK +LRQDI FFD ET+ GEV
Sbjct: 110 KVSLKFVYLGIGSSVASFLQVVCWMVTGERQAARIRGLYLKTILRQDIAFFDKETNTGEV 169

Query: 96  VGRMSGDLVLIQDAMGEKVGKSIQLISAFLGG 1
           +GRMSGD VLIQDAMGEKVGK +QL+S FLGG
Sbjct: 170 IGRMSGDTVLIQDAMGEKVGKFLQLVSTFLGG 201


>ref|XP_002273987.1| PREDICTED: ABC transporter B family member 11 [Vitis vinifera]
          Length = 1297

 Score =  144 bits (362), Expect = 1e-32
 Identities = 64/92 (69%), Positives = 81/92 (88%)
 Frame = -2

Query: 276 KVTLRFVYAGIGAAVASFFQMSCWMVTGERQSVRLRNMYLKAVLRQDITFFDMETDMGEV 97
           KV+L+FVY  +GA +A+FFQ++CWMVTGERQ+ R+R++YLK +LRQD+ FFD ET+ GEV
Sbjct: 113 KVSLKFVYLAVGAGIAAFFQVACWMVTGERQAARIRSLYLKTILRQDVAFFDKETNTGEV 172

Query: 96  VGRMSGDLVLIQDAMGEKVGKSIQLISAFLGG 1
           +GRMSGD VLIQDAMGEKVGK IQL+S F+GG
Sbjct: 173 IGRMSGDTVLIQDAMGEKVGKFIQLVSTFIGG 204


>emb|CAN76787.1| hypothetical protein VITISV_029557 [Vitis vinifera]
          Length = 1280

 Score =  144 bits (362), Expect = 1e-32
 Identities = 64/92 (69%), Positives = 81/92 (88%)
 Frame = -2

Query: 276 KVTLRFVYAGIGAAVASFFQMSCWMVTGERQSVRLRNMYLKAVLRQDITFFDMETDMGEV 97
           KV+L+FVY  +GA +A+FFQ++CWMVTGERQ+ R+R++YLK +LRQD+ FFD ET+ GEV
Sbjct: 101 KVSLKFVYLAVGAGIAAFFQVACWMVTGERQAARIRSLYLKTILRQDVAFFDKETNTGEV 160

Query: 96  VGRMSGDLVLIQDAMGEKVGKSIQLISAFLGG 1
           +GRMSGD VLIQDAMGEKVGK IQL+S F+GG
Sbjct: 161 IGRMSGDTVLIQDAMGEKVGKFIQLVSTFIGG 192


Top