BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029375
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin...    96   3e-18
ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin...    96   3e-18
emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]    96   3e-18
dbj|BAK03709.1| predicted protein [Hordeum vulgare subsp. vulgare]     93   3e-17
ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
           [Vitis vinifera]
          Length = 500

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/59 (71%), Positives = 54/59 (91%)
 Frame = -2

Query: 371 DNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWGRIPASKNGVVLQSLSI 195
           + K ++PL++LPL GFVNSLAF+KSG+FLVAGVGQEPRLGRWGR+PA++NGV +QSL +
Sbjct: 441 ETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVGQEPRLGRWGRLPAARNGVAVQSLKL 499


>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
           [Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
           protein product [Vitis vinifera]
          Length = 519

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/59 (71%), Positives = 54/59 (91%)
 Frame = -2

Query: 371 DNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWGRIPASKNGVVLQSLSI 195
           + K ++PL++LPL GFVNSLAF+KSG+FLVAGVGQEPRLGRWGR+PA++NGV +QSL +
Sbjct: 460 ETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVGQEPRLGRWGRLPAARNGVAVQSLKL 518


>emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]
          Length = 573

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/59 (71%), Positives = 54/59 (91%)
 Frame = -2

Query: 371 DNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWGRIPASKNGVVLQSLSI 195
           + K ++PL++LPL GFVNSLAF+KSG+FLVAGVGQEPRLGRWGR+PA++NGV +QSL +
Sbjct: 514 ETKDIRPLFNLPLVGFVNSLAFSKSGQFLVAGVGQEPRLGRWGRLPAARNGVAVQSLKL 572


>dbj|BAK03709.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 521

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/64 (64%), Positives = 54/64 (84%)
 Frame = -2

Query: 371 DNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWGRIPASKNGVVLQSLSIL 192
           D+K +QPL+DLPL GFVNSLA AKSGRF+VAGVG+EPRLG+WGR+  +KNGV +  LS+ 
Sbjct: 456 DSKGMQPLFDLPLDGFVNSLAIAKSGRFIVAGVGREPRLGKWGRVATAKNGVAIHRLSLQ 515

Query: 191 EEEK 180
           ++ +
Sbjct: 516 DDSE 519


>ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|222855688|gb|EEE93235.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -2

Query: 365 KRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWGRIPASKNGVVLQSLSIL 192
           K ++PLYDLPL GFVNSLAFAKSG+FL+AGVGQEPRLGRWG   A++NGV +Q L +L
Sbjct: 445 KGIRPLYDLPLTGFVNSLAFAKSGKFLLAGVGQEPRLGRWGHNSAARNGVAIQQLKLL 502