BLASTX nr result

ID: Coptis23_contig00029368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029368
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA61068.1| TPA: hypothetical protein ZEAMMB73_878502 [Zea m...    62   4e-08
ref|XP_002444893.1| hypothetical protein SORBIDRAFT_07g001000 [S...    62   6e-08
ref|XP_002509931.1| hypothetical protein RCOM_1691130 [Ricinus c...    62   6e-08
ref|XP_002533908.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002320184.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>tpg|DAA61068.1| TPA: hypothetical protein ZEAMMB73_878502 [Zea mays]
          Length = 133

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/56 (50%), Positives = 41/56 (73%)
 Frame = -2

Query: 306 EKSVGACDCQNQMKEQKGDGQEEETMAVWDCGSPLYDSFELASLGHLIDRHLMILP 139
           E++ G    Q Q + ++ D +EE  +A WDCGSPLYDSFE+ASL +++++H MILP
Sbjct: 7   EEAAGGAGLQLQTRGKEED-EEEPVLATWDCGSPLYDSFEVASLHYVLEKHTMILP 61


>ref|XP_002444893.1| hypothetical protein SORBIDRAFT_07g001000 [Sorghum bicolor]
           gi|241941243|gb|EES14388.1| hypothetical protein
           SORBIDRAFT_07g001000 [Sorghum bicolor]
          Length = 147

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 5/54 (9%)
 Frame = -2

Query: 285 DCQNQMKEQKGDGQEEET-----MAVWDCGSPLYDSFELASLGHLIDRHLMILP 139
           D   Q++ + GD +EEE      +A WDCGSPLYDSFELASL +++++H M+LP
Sbjct: 10  DLHLQLQTRGGDEEEEEEVVVQELATWDCGSPLYDSFELASLHYVLEKHTMVLP 63


>ref|XP_002509931.1| hypothetical protein RCOM_1691130 [Ricinus communis]
           gi|223549830|gb|EEF51318.1| hypothetical protein
           RCOM_1691130 [Ricinus communis]
          Length = 127

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/44 (56%), Positives = 35/44 (79%)
 Frame = -2

Query: 264 EQKGDGQEEETMAVWDCGSPLYDSFELASLGHLIDRHLMILPNS 133
           E++   + E    VWDCGSPLYDS+E+AS+GH+I+RH+M LP+S
Sbjct: 2   EEEKKKEAEAANIVWDCGSPLYDSYEIASVGHVIERHMMALPSS 45


>ref|XP_002533908.1| conserved hypothetical protein [Ricinus communis]
           gi|223526129|gb|EEF28473.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = -2

Query: 264 EQKGDGQEEETMAVWDCGSPLYDSFELASLGHLIDRHLMILPN 136
           ++  D  +++ +AVWD GSPLYDS+E+ SL HLI+RHLM LP+
Sbjct: 9   QENEDNNDDKDLAVWDLGSPLYDSYEVVSLSHLIERHLMTLPS 51


>ref|XP_002320184.1| predicted protein [Populus trichocarpa] gi|222860957|gb|EEE98499.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
 Frame = -2

Query: 273 QMKEQKGDG----QEEETMAVWDCGSPLYDSFELASLGHLIDRHLMILPN 136
           +M   K DG    QEE+T+A+WD GSPLYDS+E+ SL HLI+R LM LP+
Sbjct: 3   KMLGAKKDGLERKQEEKTLAIWDLGSPLYDSYEVVSLTHLIERQLMTLPS 52


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