BLASTX nr result

ID: Coptis23_contig00029345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029345
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635593.1| PREDICTED: uncharacterized protein LOC100854...   112   1e-22
ref|XP_002265103.2| PREDICTED: uncharacterized protein LOC100241...   112   1e-22
ref|XP_003631515.1| PREDICTED: uncharacterized protein LOC100853...   111   2e-22
ref|XP_003633421.1| PREDICTED: uncharacterized protein LOC100853...   110   3e-22
emb|CAN84057.1| hypothetical protein VITISV_036405 [Vitis vinifera]   110   3e-22

>ref|XP_003635593.1| PREDICTED: uncharacterized protein LOC100854395, partial [Vitis
           vinifera]
          Length = 683

 Score =  112 bits (279), Expect = 1e-22
 Identities = 63/164 (38%), Positives = 87/164 (53%)
 Frame = +2

Query: 308 EILLALMLNTKGKTKDDVNAXXXXXXXXXXXXYWVTKLGGKQVMPQGIFWLRKEEKKLFI 487
           E ++  +LN  GKTKD +N+                    +  +P   + L ++EKK+F 
Sbjct: 439 ESIIGTLLNIPGKTKDGLNSRLDLMDMGLRCELAPRFESNRTYLPPACYTLSRKEKKVFC 498

Query: 488 QTLRNLSVPVGFSGNWSNIVKGDSMDLRQMKSHDYHILMQHLLPVLIQHAYRDGNRKEAR 667
           QTL  L VP G+  N+ N+V  + + L  +KSHDYH LMQ LLPV    A R    K  R
Sbjct: 499 QTLAELKVPEGYCSNFRNLVSMEDLKLYGLKSHDYHTLMQQLLPV----ALRSLLPKHVR 554

Query: 668 TIITTICTFFSALCSKKVEIETLDVLERGMVKALCALERICPPS 799
             I  +  FF+ALC K V++ TLD L+  +V  LC LE+  PPS
Sbjct: 555 HAIARLSLFFNALCKKVVDVSTLDKLQNELVVTLCLLEKYFPPS 598


>ref|XP_002265103.2| PREDICTED: uncharacterized protein LOC100241310 [Vitis vinifera]
          Length = 1456

 Score =  112 bits (279), Expect = 1e-22
 Identities = 63/164 (38%), Positives = 87/164 (53%)
 Frame = +2

Query: 308 EILLALMLNTKGKTKDDVNAXXXXXXXXXXXXYWVTKLGGKQVMPQGIFWLRKEEKKLFI 487
           E ++  +LN  GKTKD +N+                    +  +P   + L ++EKK+F 
Sbjct: 439 ESIIGTLLNIPGKTKDGLNSRLDLMDMGLRCELAPRFESNRTYLPPACYTLSRKEKKVFC 498

Query: 488 QTLRNLSVPVGFSGNWSNIVKGDSMDLRQMKSHDYHILMQHLLPVLIQHAYRDGNRKEAR 667
           QTL  L VP G+  N+ N+V  + + L  +KSHDYH LMQ LLPV    A R    K  R
Sbjct: 499 QTLAELKVPEGYCSNFRNLVSMEDLKLYGLKSHDYHTLMQQLLPV----ALRSLLPKHVR 554

Query: 668 TIITTICTFFSALCSKKVEIETLDVLERGMVKALCALERICPPS 799
             I  +  FF+ALC K V++ TLD L+  +V  LC LE+  PPS
Sbjct: 555 HAIARLSLFFNALCKKVVDVSTLDQLQNELVVTLCLLEKYFPPS 598


>ref|XP_003631515.1| PREDICTED: uncharacterized protein LOC100853127 [Vitis vinifera]
          Length = 1431

 Score =  111 bits (278), Expect = 2e-22
 Identities = 63/164 (38%), Positives = 87/164 (53%)
 Frame = +2

Query: 308 EILLALMLNTKGKTKDDVNAXXXXXXXXXXXXYWVTKLGGKQVMPQGIFWLRKEEKKLFI 487
           E ++  +LN  GKTKD +N+                    +  +P   + L ++EKK+F 
Sbjct: 414 ESIIGTLLNIPGKTKDGLNSRLDLMDVGLRCELAPRFESNRTYLPPACYTLPRKEKKVFC 473

Query: 488 QTLRNLSVPVGFSGNWSNIVKGDSMDLRQMKSHDYHILMQHLLPVLIQHAYRDGNRKEAR 667
           QTL  L VP G+  N+ N+V  + + L  +KSHDYH LMQ LLPV    A R    K  R
Sbjct: 474 QTLAELKVPEGYCSNFRNLVSMEDLKLYGLKSHDYHTLMQQLLPV----ALRSLLPKHVR 529

Query: 668 TIITTICTFFSALCSKKVEIETLDVLERGMVKALCALERICPPS 799
             I  +  FF+ALC K V++ TLD L+  +V  LC LE+  PPS
Sbjct: 530 HAIARLSLFFNALCKKVVDVSTLDKLQNELVVTLCLLEKYFPPS 573


>ref|XP_003633421.1| PREDICTED: uncharacterized protein LOC100853694 [Vitis vinifera]
          Length = 1019

 Score =  110 bits (276), Expect = 3e-22
 Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
 Frame = +2

Query: 308 EILLALMLNTKGKTKDDVNAXXXXXXXXXXXXYWVTKLGGKQV-MPQGIFWLRKEEKKLF 484
           E ++  +LN  GKTKD V +                + G K+  +P   + L ++EKK+ 
Sbjct: 488 ESIIGTLLNIPGKTKDGVKSRLDLLEMGLRPDL-APRFGLKRTYLPPACYTLSRKEKKIV 546

Query: 485 IQTLRNLSVPVGFSGNWSNIVKGDSMDLRQMKSHDYHILMQHLLPVLIQHAYRDGNRKEA 664
           +QTL +L VP G+  N+ N+V  + + L  +KSHDYH LMQ LLPV    A R    K  
Sbjct: 547 LQTLADLKVPEGYCSNFRNLVSMEELKLNGLKSHDYHALMQQLLPV----ALRSMLPKHV 602

Query: 665 RTIITTICTFFSALCSKKVEIETLDVLERGMVKALCALERICPPS 799
           R  IT +C FF+ALC+K V++  L+ +++ +V  LC LE+  PPS
Sbjct: 603 RYAITRLCFFFNALCAKVVDVSRLNDIQQDIVVTLCLLEKYFPPS 647


>emb|CAN84057.1| hypothetical protein VITISV_036405 [Vitis vinifera]
          Length = 1194

 Score =  110 bits (276), Expect = 3e-22
 Identities = 63/164 (38%), Positives = 86/164 (52%)
 Frame = +2

Query: 308 EILLALMLNTKGKTKDDVNAXXXXXXXXXXXXYWVTKLGGKQVMPQGIFWLRKEEKKLFI 487
           E ++  +LN  GKTKD +N                     +  +P   + L ++EKK+F 
Sbjct: 429 ESIIGTLLNIPGKTKDGLNFRLDLMDMGLRCELAPRFESNRTYLPPACYTLSRKEKKVFC 488

Query: 488 QTLRNLSVPVGFSGNWSNIVKGDSMDLRQMKSHDYHILMQHLLPVLIQHAYRDGNRKEAR 667
           QTL  L VP G+  N+ N+V  + + L  +KSHDYH LMQ LLPV    A R    K  R
Sbjct: 489 QTLAELKVPEGYCSNFRNLVSMEDLKLYGLKSHDYHTLMQQLLPV----ALRSLLPKHVR 544

Query: 668 TIITTICTFFSALCSKKVEIETLDVLERGMVKALCALERICPPS 799
             I  +  FF+ALC K V++ TLD L+  +V  LC LE+  PPS
Sbjct: 545 HAIARLSLFFNALCKKVVDVSTLDQLQNELVVTLCLLEKYFPPS 588


Top