BLASTX nr result

ID: Coptis23_contig00029343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029343
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620351.1| hypothetical protein MTR_6g081810 [Medicago ...    57   3e-06
ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vit...    57   5e-06
emb|CBI15521.3| unnamed protein product [Vitis vinifera]               57   5e-06
ref|XP_002280423.1| PREDICTED: MATE efflux family protein 6 isof...    57   5e-06

>ref|XP_003620351.1| hypothetical protein MTR_6g081810 [Medicago truncatula]
           gi|355495366|gb|AES76569.1| hypothetical protein
           MTR_6g081810 [Medicago truncatula]
          Length = 496

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = +3

Query: 288 QGLWMGIICVLFVQFLMLVTIILRTDWDKEARKAMDGVKTFIIT 419
           +GLW+GIIC LFVQ + L  I +RTDW+KEA+KA D V   I T
Sbjct: 448 KGLWLGIICALFVQVVSLTIITIRTDWEKEAKKATDRVYDSITT 491


>ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vitis vinifera]
          Length = 399

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = +3

Query: 288 QGLWMGIICVLFVQFLMLVTIILRTDWDKEARKAMDGVKTFIITSDTG 431
           +GLW+GIIC L VQ L L+ + LRT+W+ EA+KA D V   II  +TG
Sbjct: 349 RGLWLGIICALIVQVLSLLIVTLRTNWEDEAKKATDRVYDAIIPIETG 396


>emb|CBI15521.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = +3

Query: 288 QGLWMGIICVLFVQFLMLVTIILRTDWDKEARKAMDGVKTFIITSDTG 431
           +GLW+GIIC L VQ L L+ + LRT+W+ EA+KA D V   II  +TG
Sbjct: 513 RGLWLGIICALIVQVLSLLIVTLRTNWEDEAKKATDRVYDAIIPIETG 560


>ref|XP_002280423.1| PREDICTED: MATE efflux family protein 6 isoform 2 [Vitis vinifera]
          Length = 493

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = +3

Query: 288 QGLWMGIICVLFVQFLMLVTIILRTDWDKEARKAMDGVKTFIITSDTG 431
           +GLW+GIIC L VQ L L+ + LRT+W+ EA+KA D V   II  +TG
Sbjct: 443 RGLWLGIICALIVQVLSLLIVTLRTNWEDEAKKATDRVYDAIIPIETG 490


Top