BLASTX nr result

ID: Coptis23_contig00029318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029318
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera] gi|3...   139   3e-31
ref|XP_002510103.1| cyclin d, putative [Ricinus communis] gi|223...   137   9e-31
ref|XP_003527735.1| PREDICTED: cyclin-D5-1-like [Glycine max]         134   1e-29
ref|XP_003523620.1| PREDICTED: cyclin-D5-1-like [Glycine max]         130   9e-29
ref|XP_004172256.1| PREDICTED: cyclin-D5-1-like, partial [Cucumi...   127   1e-27

>ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera]
           gi|302142205|emb|CBI19408.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/84 (79%), Positives = 75/84 (89%)
 Frame = -1

Query: 253 FGFCFQTAYLSISYFDRFLSKRSIDSEKPWAIQLLSVACLTLAAKMEECHVPALSEFRTE 74
           FGF FQTAYL ++Y DRFLS+R+IDS+K WAI+LLSVACL+LAAKMEEC  PALSEF  E
Sbjct: 81  FGFRFQTAYLCVAYLDRFLSRRAIDSDKTWAIRLLSVACLSLAAKMEECRAPALSEFAVE 140

Query: 73  EFYFESKVIQRMELLVLNTLEWRM 2
           E+ FESKVIQRMELLVLNTLEWRM
Sbjct: 141 EYNFESKVIQRMELLVLNTLEWRM 164


>ref|XP_002510103.1| cyclin d, putative [Ricinus communis] gi|223550804|gb|EEF52290.1|
           cyclin d, putative [Ricinus communis]
          Length = 327

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/84 (80%), Positives = 75/84 (89%)
 Frame = -1

Query: 253 FGFCFQTAYLSISYFDRFLSKRSIDSEKPWAIQLLSVACLTLAAKMEECHVPALSEFRTE 74
           FGF FQTAYLSI+YFDRFLS+RSID EK WA++LLSVACL+LAAKMEE  VP LS F+ E
Sbjct: 87  FGFGFQTAYLSITYFDRFLSRRSIDREKSWAVKLLSVACLSLAAKMEEIKVPPLSNFQIE 146

Query: 73  EFYFESKVIQRMELLVLNTLEWRM 2
           E+ FESKVIQRMELLVLNTLEWRM
Sbjct: 147 EYNFESKVIQRMELLVLNTLEWRM 170


>ref|XP_003527735.1| PREDICTED: cyclin-D5-1-like [Glycine max]
          Length = 314

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/83 (74%), Positives = 76/83 (91%)
 Frame = -1

Query: 250 GFCFQTAYLSISYFDRFLSKRSIDSEKPWAIQLLSVACLTLAAKMEECHVPALSEFRTEE 71
           GF F+TAYLS++YFDRFLS+RSIDSEK WAI+LLS+ACL+LAAKMEEC+VP LSEF+ ++
Sbjct: 87  GFRFETAYLSVTYFDRFLSRRSIDSEKSWAIRLLSIACLSLAAKMEECNVPGLSEFKLDD 146

Query: 70  FYFESKVIQRMELLVLNTLEWRM 2
           + FE KVIQ+MELLVL+TLEW M
Sbjct: 147 YSFEGKVIQKMELLVLSTLEWEM 169


>ref|XP_003523620.1| PREDICTED: cyclin-D5-1-like [Glycine max]
          Length = 312

 Score =  130 bits (328), Expect = 9e-29
 Identities = 61/83 (73%), Positives = 75/83 (90%)
 Frame = -1

Query: 250 GFCFQTAYLSISYFDRFLSKRSIDSEKPWAIQLLSVACLTLAAKMEECHVPALSEFRTEE 71
           GF F+TAYLS++YFDRFL +RSIDSEK WAI+LLS+ACL+LAAKMEEC VP LSEF+ ++
Sbjct: 86  GFRFETAYLSVTYFDRFLFRRSIDSEKSWAIRLLSIACLSLAAKMEECIVPGLSEFKLDD 145

Query: 70  FYFESKVIQRMELLVLNTLEWRM 2
           + FE KVIQ+MELLVL+TLEW+M
Sbjct: 146 YSFEGKVIQKMELLVLSTLEWKM 168


>ref|XP_004172256.1| PREDICTED: cyclin-D5-1-like, partial [Cucumis sativus]
          Length = 242

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/84 (75%), Positives = 74/84 (88%)
 Frame = -1

Query: 253 FGFCFQTAYLSISYFDRFLSKRSIDSEKPWAIQLLSVACLTLAAKMEECHVPALSEFRTE 74
           FGF  QTAYLS+ YFDRFLS+R+I +EK WAI+LL+VACL+LA+KMEE  VPALSEF  +
Sbjct: 75  FGFGCQTAYLSMIYFDRFLSRRAITNEKLWAIRLLAVACLSLASKMEELKVPALSEFPVD 134

Query: 73  EFYFESKVIQRMELLVLNTLEWRM 2
           +F FESKVIQRMELLVLNTLEW+M
Sbjct: 135 DFNFESKVIQRMELLVLNTLEWKM 158


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