BLASTX nr result

ID: Coptis23_contig00029314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029314
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21872.3| unnamed protein product [Vitis vinifera]              243   3e-62
ref|XP_002515263.1| hypothetical protein RCOM_1346560 [Ricinus c...   219   3e-55
ref|XP_003633267.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease...   219   5e-55
emb|CAN79216.1| hypothetical protein VITISV_012793 [Vitis vinifera]   219   5e-55
ref|XP_004168460.1| PREDICTED: uncharacterized protein LOC101229...   211   1e-52

>emb|CBI21872.3| unnamed protein product [Vitis vinifera]
          Length = 806

 Score =  243 bits (620), Expect = 3e-62
 Identities = 130/208 (62%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
 Frame = +1

Query: 4    ILSTHLNDIHGNHLLVFPNKKLGKK-TKLLESRDKLELDPERAGQIPLDRKLCFLRVLLR 180
            +LS +LN+IHGNHLL+FP     K  ++L+    KL  +   A  I  +R LCFLRVLL 
Sbjct: 599  MLSYYLNEIHGNHLLLFPKFPDKKSFSELMIDEAKLSRNLNGASPINSERNLCFLRVLLH 658

Query: 181  AYKEGAFEEGAVICAPRLTDILLWTSRSDVHEEQLQIPQSLLGSYYTLQTSGKWELQKPK 360
            AYKEG+FEEGAV+CAP L+DI +WTSRS   E  LQIPQS + SY+  Q+SGKWELQ P+
Sbjct: 659  AYKEGSFEEGAVVCAPHLSDISMWTSRSRSTETGLQIPQSSVRSYFKEQSSGKWELQIPE 718

Query: 361  DPVTWESHRWPIGFVTTGFVRGSTIPTAEAFCESTLLAQLRREQWEGKHGKQRKCEIFVL 540
            D VT ES+R PIGFVTTGFVRGS    AEA CE+ LLA+LR EQW     K+R+ EI+VL
Sbjct: 719  DTVTRESNRQPIGFVTTGFVRGSKKLKAEALCEAILLARLREEQWNEMPMKERRKEIYVL 778

Query: 541  VRNLRSTAYRLALATIVLEQQREDVDFL 624
            VRNLRSTAYRLALATI+LEQQ EDV+F+
Sbjct: 779  VRNLRSTAYRLALATIILEQQEEDVEFM 806


>ref|XP_002515263.1| hypothetical protein RCOM_1346560 [Ricinus communis]
            gi|223545743|gb|EEF47247.1| hypothetical protein
            RCOM_1346560 [Ricinus communis]
          Length = 838

 Score =  219 bits (559), Expect = 3e-55
 Identities = 118/209 (56%), Positives = 148/209 (70%), Gaps = 2/209 (0%)
 Frame = +1

Query: 4    ILSTHLNDIHGNHLLVFPNKKLGKKT--KLLESRDKLELDPERAGQIPLDRKLCFLRVLL 177
            +L+  LN+I G+ LL+FP    GK    +L+    K +       QI  D KLCF+RVLL
Sbjct: 631  VLADFLNEISGDQLLLFPQVPKGKMRIMELMMEESKHDSLQNGINQITYDCKLCFVRVLL 690

Query: 178  RAYKEGAFEEGAVICAPRLTDILLWTSRSDVHEEQLQIPQSLLGSYYTLQTSGKWELQKP 357
             A KEG FEEGAVICAP L D+ LWTSRS+ +E   QIPQS   SY+  Q+SG+WELQ P
Sbjct: 691  HACKEGVFEEGAVICAPCLGDLSLWTSRSERNEAGFQIPQSYGSSYFKEQSSGRWELQLP 750

Query: 358  KDPVTWESHRWPIGFVTTGFVRGSTIPTAEAFCESTLLAQLRREQWEGKHGKQRKCEIFV 537
            ++ +  ES+RWPIGFVTTGFVRGS  P AEA CE+ LLA+LR +QW     +QR+ EI+V
Sbjct: 751  ENAIARESYRWPIGFVTTGFVRGSKKPVAEALCEAVLLARLREKQWNEISVQQRRKEIYV 810

Query: 538  LVRNLRSTAYRLALATIVLEQQREDVDFL 624
            LVRNLRS+ YRL +A+IVLEQQ ED++FL
Sbjct: 811  LVRNLRSSTYRLGVASIVLEQQ-EDLEFL 838


>ref|XP_003633267.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleases P/MRP protein subunit
            POP1-like [Vitis vinifera]
          Length = 745

 Score =  219 bits (558), Expect = 5e-55
 Identities = 120/192 (62%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
 Frame = +1

Query: 52   FPNKKLGKKTKLLESRDKLELDPERAGQIPLDRKLCFLRVLLRAYKEGAFEEGAVICAPR 231
            FP+KK    ++L+    KL  +   A  I  +R LCFLRVLL AYKEG+FEEGAV+CAP 
Sbjct: 556  FPDKK--SFSELMIDEAKLSRNLNGASPINSERNLCFLRVLLHAYKEGSFEEGAVVCAPH 613

Query: 232  LTDILLWTSR-SDVHEEQLQIPQSLLGSYYTLQTSGKWELQKPKDPVTWESHRWPIGFVT 408
            L+DI +WTSR S   E  LQIPQS + SY+  Q+SGKWELQ P+D VT ES+R PIGFVT
Sbjct: 614  LSDISMWTSRXSRSTETGLQIPQSSVRSYFKEQSSGKWELQIPEDTVTRESNRQPIGFVT 673

Query: 409  TGFVRGSTIPTAEAFCESTLLAQLRREQWEGKHGKQRKCEIFVLVRNLRSTAYRLALATI 588
            TGFVRGS    AEA CE+ LLA+LR EQW     K+R+ EI+VLVRNLRSTAYRLALATI
Sbjct: 674  TGFVRGSKKLKAEALCEAILLARLREEQWNEMPMKERRKEIYVLVRNLRSTAYRLALATI 733

Query: 589  VLEQQREDVDFL 624
            +LEQQ EDV+F+
Sbjct: 734  ILEQQEEDVEFM 745


>emb|CAN79216.1| hypothetical protein VITISV_012793 [Vitis vinifera]
          Length = 743

 Score =  219 bits (558), Expect = 5e-55
 Identities = 114/174 (65%), Positives = 134/174 (77%)
 Frame = +1

Query: 103  KLELDPERAGQIPLDRKLCFLRVLLRAYKEGAFEEGAVICAPRLTDILLWTSRSDVHEEQ 282
            KL  +   A  I  +R LCFLRVL+ AYKEG+FEEGAV+CAP L+DI +WTSRS   E  
Sbjct: 570  KLSRNLNGASPINSERNLCFLRVLJHAYKEGSFEEGAVVCAPHLSDISMWTSRSRSTETG 629

Query: 283  LQIPQSLLGSYYTLQTSGKWELQKPKDPVTWESHRWPIGFVTTGFVRGSTIPTAEAFCES 462
            LQIPQS + SY+  Q+SGKWELQ P+D VT ES+R PIGFVTTGFVRGS    AEA CE+
Sbjct: 630  LQIPQSSVRSYFKEQSSGKWELQIPEDTVTRESNRQPIGFVTTGFVRGSKKLKAEALCEA 689

Query: 463  TLLAQLRREQWEGKHGKQRKCEIFVLVRNLRSTAYRLALATIVLEQQREDVDFL 624
             LLA+LR EQW     K+R+ EI+VLVRNLRSTAYRLALATI+LEQQ EDV+F+
Sbjct: 690  ILLARLREEQWNEMPMKERRKEIYVLVRNLRSTAYRLALATIILEQQEEDVEFM 743


>ref|XP_004168460.1| PREDICTED: uncharacterized protein LOC101229548 [Cucumis sativus]
          Length = 845

 Score =  211 bits (537), Expect = 1e-52
 Identities = 112/206 (54%), Positives = 148/206 (71%), Gaps = 4/206 (1%)
 Frame = +1

Query: 19   LNDIHGNHLLVFPNKKLGKKTKLLESRDKLELDPERAG--QIPLDRKLCFLRVLLRAYKE 192
            L+DI   HL +FP  +  KK ++LE  +K  +D  ++   Q     K CFLRV+LRAYK+
Sbjct: 642  LSDIKLEHLPLFPQGR-EKKARILEFLNKSTVDQCKSSINQFCYTGKSCFLRVILRAYKK 700

Query: 193  GAFEEGAVICAPRLTDILLWTSRSDVHEEQLQIPQSLLGSYYTL--QTSGKWELQKPKDP 366
            GAFEEGAVICAP+  D+ LWTSRS   E  LQIP+S +  Y+ L  Q+   WELQ P+D 
Sbjct: 701  GAFEEGAVICAPKSADLSLWTSRSVDEERALQIPESAVKHYFKLKQQSPSMWELQLPEDD 760

Query: 367  VTWESHRWPIGFVTTGFVRGSTIPTAEAFCESTLLAQLRREQWEGKHGKQRKCEIFVLVR 546
            V  E HRWPIGFVTTGFV GS  P AE  CE+TLLA+LR +QW+G   K+++ +I+VLVR
Sbjct: 761  VAREYHRWPIGFVTTGFVHGSKKPVAEGLCEATLLARLRVQQWDGMFAKKKE-QIYVLVR 819

Query: 547  NLRSTAYRLALATIVLEQQREDVDFL 624
            NLRS+AYR+ALAT++LEQ+ +D++F+
Sbjct: 820  NLRSSAYRVALATVILEQREDDLEFM 845


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