BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029307
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus ...    76   3e-12
ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncat...    75   7e-12
gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla]    70   1e-10
ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncat...    70   1e-10
tpg|DAA38481.1| TPA: hypothetical protein ZEAMMB73_861794, parti...    62   4e-08

>ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus communis]
           gi|223546055|gb|EEF47558.1| 50S ribosomal protein L2,
           putative [Ricinus communis]
          Length = 111

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +2

Query: 131 ISSYTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTSI 253
           ISS T RKPYALEEACTVWE +LIDQKEESTSTDMPLGT+I
Sbjct: 5   ISSSTPRKPYALEEACTVWEEILIDQKEESTSTDMPLGTAI 45


>ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355506651|gb|AES87793.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 399

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/48 (79%), Positives = 39/48 (81%)
 Frame = +2

Query: 131 ISSYTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTSI*QIRKVL 274
           IS    RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT+I  I   L
Sbjct: 164 ISFDGQRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 211


>gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla]
          Length = 122

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/40 (85%), Positives = 35/40 (87%)
 Frame = +2

Query: 155 PYALEEACTVWEGVLIDQKEESTSTDMPLGTSI*QIRKVL 274
           PYALEEACTVWEGVLIDQKEESTSTDMPLGT+I  I   L
Sbjct: 1   PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 40


>ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355507116|gb|AES88258.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 382

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/40 (85%), Positives = 35/40 (87%)
 Frame = +2

Query: 155 PYALEEACTVWEGVLIDQKEESTSTDMPLGTSI*QIRKVL 274
           PYALEEACTVWEGVLIDQKEESTSTDMPLGT+I  I   L
Sbjct: 235 PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITL 274


>tpg|DAA38481.1| TPA: hypothetical protein ZEAMMB73_861794, partial [Zea mays]
          Length = 137

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = -3

Query: 264 LICYIDVPKGISVEVDSSF*SIKTPSQTVQASSKAYGFLDVY 139
           ++C + VPKGISVEVDSSF S K PSQTVQASSKAYGFLDVY
Sbjct: 98  MLCMV-VPKGISVEVDSSFFS-KNPSQTVQASSKAYGFLDVY 137