BLASTX nr result

ID: Coptis23_contig00029304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029304
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]   132   4e-29
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]   129   2e-28
emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]   122   5e-26
emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]   122   5e-26
ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820...   117   1e-24

>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score =  132 bits (332), Expect = 4e-29
 Identities = 67/138 (48%), Positives = 94/138 (68%), Gaps = 4/138 (2%)
 Frame = +1

Query: 145 TWIENTCVSPGSANS---ADTAKDVWDDLHSRFSQGNPARIFQIKLDIGNHHQEEACITT 315
           +W+ N+ + P  A+S   A+T  ++W DL  RFSQGN +RI+QIK DI  H Q +  I+ 
Sbjct: 86  SWLLNS-IHPDIASSVIYAETTSEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISV 144

Query: 316 HFTKLKALWDELGSYNTIPDCTCGSAKATQELQQKELVIQFLMGLNDLYAPLRSQI-LAK 492
           ++TKLKA WDEL SY+ +  C+CG  +  +E+ +KE V+QFLMGLND YA +R QI L +
Sbjct: 145 YYTKLKAFWDELSSYHEVLSCSCGGLEKLKEMDEKERVMQFLMGLNDSYAAIRGQILLMQ 204

Query: 493 GIPPLGTVYSLLLQEEMQ 546
            +P    VYSL+LQ+E Q
Sbjct: 205 PLPDTRRVYSLVLQQEKQ 222


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/141 (48%), Positives = 94/141 (66%), Gaps = 4/141 (2%)
 Frame = +1

Query: 145 TWIENTCVSPGSANS---ADTAKDVWDDLHSRFSQGNPARIFQIKLDIGNHHQEEACITT 315
           +W+ N+ + P  A+S   A+TA ++W DL  RFSQGN +RI+QIK DI  H Q +  I+ 
Sbjct: 89  SWLLNS-IHPDIASSVIYAETASEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISV 147

Query: 316 HFTKLKALWDELGSYNTIPDCTCGSAKATQELQQKELVIQFLMGLNDLYAPLRSQILAKG 495
           ++TKLKA  DEL SY+ +  C+CG  +  +E  +KE V+QFLMGLND YA +R QIL   
Sbjct: 148 YYTKLKAFXDELSSYHEVLSCSCGGLEKLKERDEKERVMQFLMGLNDSYAAIRGQILLMX 207

Query: 496 -IPPLGTVYSLLLQEEMQREV 555
            +P    VYSL+LQ+E Q EV
Sbjct: 208 PLPDTRXVYSLVLQQEKQVEV 228


>emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]
          Length = 987

 Score =  122 bits (305), Expect = 5e-26
 Identities = 59/124 (47%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
 Frame = +1

Query: 193 DTAKDVWDDLHSRFSQGNPARIFQIKLDIGNHHQEEACITTHFTKLKALWDELGSYNTIP 372
           +T  ++W+DL+ RF QG+  RIF+IK  I  H Q  A + T++T+ K+LWDEL  +  IP
Sbjct: 110 ETTIEIWNDLYERFHQGSGPRIFEIKQKILAHTQGLAYVNTYYTRQKSLWDELREFKAIP 169

Query: 373 DCTCGSAKATQELQQKELVIQFLMGLNDLYAPLRSQI-LAKGIPPLGTVYSLLLQEEMQR 549
            C CG  +   E QQ+E V+QFL+GLN+ +AP+R+QI L K  PPL  V+SL++QEE QR
Sbjct: 170 VCNCGGMRVYMEDQQRESVMQFLLGLNESFAPIRAQILLMKPTPPLNKVFSLVVQEERQR 229

Query: 550 EVHV 561
            + +
Sbjct: 230 SLTI 233


>emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]
          Length = 1240

 Score =  122 bits (305), Expect = 5e-26
 Identities = 59/124 (47%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
 Frame = +1

Query: 193 DTAKDVWDDLHSRFSQGNPARIFQIKLDIGNHHQEEACITTHFTKLKALWDELGSYNTIP 372
           +T  ++W+DL+ RF QG+  RIF+IK  I  H Q  A + T++T+ K+LWDEL  +  IP
Sbjct: 110 ETTIEIWNDLYERFHQGSGPRIFEIKQKILAHTQGLAYVNTYYTRQKSLWDELREFKAIP 169

Query: 373 DCTCGSAKATQELQQKELVIQFLMGLNDLYAPLRSQI-LAKGIPPLGTVYSLLLQEEMQR 549
            C CG  +   E QQ+E V+QFL+GLN+ +AP+R+QI L K  PPL  V+SL++QEE QR
Sbjct: 170 VCNCGGMRVYMEDQQRESVMQFLLGLNESFAPIRAQILLMKPTPPLNKVFSLVVQEERQR 229

Query: 550 EVHV 561
            + +
Sbjct: 230 SLTI 233


>ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820591 [Glycine max]
          Length = 1057

 Score =  117 bits (294), Expect = 1e-24
 Identities = 60/142 (42%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
 Frame = +1

Query: 145 TWIENTCVSP--GSANSADTAKDVWDDLHSRFSQGNPARIFQIKLDIGNHHQEEACITTH 318
           +W+ N+       S   A+TAK++W+DL +RFS+ N  RIFQ+K  + +  Q     +T+
Sbjct: 39  SWLYNSVFKDIISSILFANTAKEIWEDLKTRFSRKNGPRIFQLKRQLMSLQQGNDDASTY 98

Query: 319 FTKLKALWDELGSYNTIPDCTCGSAKATQELQQKELVIQFLMGLNDLYAPLRSQI-LAKG 495
           +TKLK++W+EL  Y     C CG  +  Q+  + E V+ FLMGLND +A +R QI L+  
Sbjct: 99  YTKLKSVWEELSGYKPTFRCKCGGLQTLQDYIESEYVMSFLMGLNDSFAQVRGQILLSDP 158

Query: 496 IPPLGTVYSLLLQEEMQREVHV 561
           +PP+G V+SL++QEE QRE+ V
Sbjct: 159 LPPIGNVFSLVIQEEAQREIVV 180


Top