BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029302
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_817527.1| NADH-plastoquinone oxidoreductase subunit 2 [Co...   465   e-129
ref|YP_817542.1| NADH-plastoquinone oxidoreductase subunit 2 [Co...   459   e-127
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [...   436   e-120
tpg|DAA49746.1| TPA: hypothetical protein ZEAMMB73_716067 [Zea m...   410   e-112
tpg|DAA39818.1| TPA: hypothetical protein ZEAMMB73_327393 [Zea m...   410   e-112

>ref|YP_817527.1| NADH-plastoquinone oxidoreductase subunit 2 [Coffea arabica]
           gi|288561930|sp|P0CC48.1|NU2C1_COFAR RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A gi|116242208|gb|ABJ89723.1|
           NADH-plastoquinone oxidoreductase subunit 2 [Coffea
           arabica]
          Length = 541

 Score =  465 bits (1197), Expect = e-129
 Identities = 227/237 (95%), Positives = 231/237 (97%)
 Frame = +3

Query: 3   DIPWLYFISSTSLIMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLS 182
           DIPWLYFI STSL+MSI ALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLS
Sbjct: 56  DIPWLYFIPSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLS 115

Query: 183 VEYIECTEMEITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRDVR 362
           VEYIECTEM ITEFLLFVLTATLGGMFLCGAND ITIFVAPECFSLCSYLLSGYTK+DVR
Sbjct: 116 VEYIECTEMAITEFLLFVLTATLGGMFLCGANDFITIFVAPECFSLCSYLLSGYTKKDVR 175

Query: 363 SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF 542
           SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF
Sbjct: 176 SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF 235

Query: 543 ITVGIGFKLSPAPSHQWTPDVYEGVRFVR*IPASISISEMFGFFKTPWTCRREMLSP 713
           ITVGIGFKLSPAPSHQWTPDVYEGVRFVR IP S+SISEMFGFFKTPWTCRRE+LSP
Sbjct: 236 ITVGIGFKLSPAPSHQWTPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREILSP 292


>ref|YP_817542.1| NADH-plastoquinone oxidoreductase subunit 2 [Coffea arabica]
           gi|288562000|sp|P0CC49.1|NU2C2_COFAR RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B gi|116242225|gb|ABJ89740.1|
           NADH-plastoquinone oxidoreductase subunit 2 [Coffea
           arabica]
          Length = 540

 Score =  459 bits (1182), Expect = e-127
 Identities = 224/234 (95%), Positives = 228/234 (97%)
 Frame = +3

Query: 3   DIPWLYFISSTSLIMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLS 182
           DIPWLYFI STSL+MSI ALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLS
Sbjct: 56  DIPWLYFIPSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLS 115

Query: 183 VEYIECTEMEITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRDVR 362
           VEYIECTEM ITEFLLFVLTATLGGMFLCGAND ITIFVAPECFSLCSYLLSGYTK+DVR
Sbjct: 116 VEYIECTEMAITEFLLFVLTATLGGMFLCGANDFITIFVAPECFSLCSYLLSGYTKKDVR 175

Query: 363 SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF 542
           SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF
Sbjct: 176 SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF 235

Query: 543 ITVGIGFKLSPAPSHQWTPDVYEGVRFVR*IPASISISEMFGFFKTPWTCRREM 704
           ITVGIGFKLSPAPSHQWTPDVYEGVRFVR IP S+SISEMFGFFKTPWTCRRE+
Sbjct: 236 ITVGIGFKLSPAPSHQWTPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREI 289


>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
            gi|355488626|gb|AES69829.1| NAD(P)H-quinone
            oxidoreductase subunit 2 A [Medicago truncatula]
          Length = 871

 Score =  436 bits (1122), Expect = e-120
 Identities = 216/239 (90%), Positives = 224/239 (93%)
 Frame = +3

Query: 3    DIPWLYFISSTSLIMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLS 182
            D+ W YFISSTSL+MSI ALLFRWREEPMISFSGNFQTNNFNEIFQFLILL STLCIPLS
Sbjct: 360  DLSWFYFISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLSSTLCIPLS 419

Query: 183  VEYIECTEMEITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRDVR 362
            VEYIECTEM ITEFLLF+LTATLGGMFLC ANDLITIFVA ECFSLCSYLLSGYTK+DVR
Sbjct: 420  VEYIECTEMAITEFLLFILTATLGGMFLCSANDLITIFVALECFSLCSYLLSGYTKKDVR 479

Query: 363  SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF 542
            SNEATMKYLLMGGASSSILVHGFSWLYG SGGEIELQEIVNGLINTQMYNSPGISIALIF
Sbjct: 480  SNEATMKYLLMGGASSSILVHGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIF 539

Query: 543  ITVGIGFKLSPAPSHQWTPDVYEGVRFVR*IPASISISEMFGFFKTPWTCRREMLSPLG 719
            ITVGIGFKLS APSHQWTPDVYEGVRFVR IP S+SISEMFGFFKT WTCRR++   +G
Sbjct: 540  ITVGIGFKLSLAPSHQWTPDVYEGVRFVREIPTSLSISEMFGFFKTLWTCRRDIYYIVG 598


>tpg|DAA49746.1| TPA: hypothetical protein ZEAMMB73_716067 [Zea mays]
           gi|414885046|tpg|DAA61060.1| TPA: hypothetical protein
           ZEAMMB73_816919 [Zea mays]
          Length = 270

 Score =  410 bits (1054), Expect = e-112
 Identities = 202/215 (93%), Positives = 207/215 (96%)
 Frame = +3

Query: 3   DIPWLYFISSTSLIMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLS 182
           D PW YFISSTSL++SI ALLFRWREEP+ISFSGNFQTNNFNEIFQFLILLCSTLCIPLS
Sbjct: 56  DRPWFYFISSTSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLS 115

Query: 183 VEYIECTEMEITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRDVR 362
           VEYIECTEM ITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRD+R
Sbjct: 116 VEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRDLR 175

Query: 363 SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF 542
           SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF
Sbjct: 176 SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF 235

Query: 543 ITVGIGFKLSPAPSHQWTPDVYEGVRFVR*IPASI 647
           ITVG+GFKLSPAP HQWTPDVYEGV FVR IP SI
Sbjct: 236 ITVGLGFKLSPAPFHQWTPDVYEGVWFVRQIPTSI 270


>tpg|DAA39818.1| TPA: hypothetical protein ZEAMMB73_327393 [Zea mays]
          Length = 270

 Score =  410 bits (1054), Expect = e-112
 Identities = 202/215 (93%), Positives = 207/215 (96%)
 Frame = +3

Query: 3   DIPWLYFISSTSLIMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLS 182
           D PW YFISSTSL++SI ALLFRWREEP+ISFSGNFQTNNFNEIFQFLILLCSTLCIPLS
Sbjct: 56  DRPWFYFISSTSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLS 115

Query: 183 VEYIECTEMEITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRDVR 362
           VEYIECTEM ITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRD+R
Sbjct: 116 VEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRDLR 175

Query: 363 SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF 542
           SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF
Sbjct: 176 SNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIF 235

Query: 543 ITVGIGFKLSPAPSHQWTPDVYEGVRFVR*IPASI 647
           ITVG+GFKLSPAP HQWTPDVYEGV FVR IP SI
Sbjct: 236 ITVGLGFKLSPAPFHQWTPDVYEGVWFVRQIPTSI 270