BLASTX nr result

ID: Coptis23_contig00029298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029298
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258...    77   1e-12
ref|XP_004156093.1| PREDICTED: uncharacterized protein LOC101225...    75   4e-12
ref|XP_004140245.1| PREDICTED: uncharacterized protein LOC101218...    75   4e-12
ref|XP_002302858.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|NP_180692.3| embryo defective 1381 protein [Arabidopsis thal...    69   4e-10

>ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258570 [Vitis vinifera]
           gi|297739214|emb|CBI28865.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/73 (56%), Positives = 50/73 (68%)
 Frame = -2

Query: 219 PPTLKSLNVQLETCLEQLVEKGISLGAIGSQQVFTTLNKWHGINTALCRIIDTRTALPVS 40
           PP+L +L  QLE CLE + EK + LG I SQQ+FTTLNKWH +NTAL RII++      S
Sbjct: 90  PPSLTNLRTQLELCLESMAEKAVRLGTISSQQIFTTLNKWHSLNTALRRIIESNK----S 145

Query: 39  GSRSVSKRNDKVS 1
            S +VS   DKVS
Sbjct: 146 SSNAVS---DKVS 155


>ref|XP_004156093.1| PREDICTED: uncharacterized protein LOC101225211 [Cucumis sativus]
          Length = 563

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/68 (50%), Positives = 48/68 (70%)
 Frame = -2

Query: 219 PPTLKSLNVQLETCLEQLVEKGISLGAIGSQQVFTTLNKWHGINTALCRIIDTRTALPVS 40
           PP+L +  ++LE+CLE + EKG+ LG+I S Q+FTT+NKWHG+NTAL R++    A    
Sbjct: 90  PPSLSNCRIKLESCLESMAEKGVKLGSITSHQIFTTMNKWHGLNTALRRVLQVDNA---- 145

Query: 39  GSRSVSKR 16
             R VS+R
Sbjct: 146 SKRVVSRR 153


>ref|XP_004140245.1| PREDICTED: uncharacterized protein LOC101218685 [Cucumis sativus]
          Length = 541

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/68 (50%), Positives = 48/68 (70%)
 Frame = -2

Query: 219 PPTLKSLNVQLETCLEQLVEKGISLGAIGSQQVFTTLNKWHGINTALCRIIDTRTALPVS 40
           PP+L +  ++LE+CLE + EKG+ LG+I S Q+FTT+NKWHG+NTAL R++    A    
Sbjct: 90  PPSLSNCRIKLESCLESMAEKGVKLGSITSHQIFTTMNKWHGLNTALRRVLQVDNA---- 145

Query: 39  GSRSVSKR 16
             R VS+R
Sbjct: 146 SKRVVSRR 153


>ref|XP_002302858.1| predicted protein [Populus trichocarpa] gi|222844584|gb|EEE82131.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
 Frame = -2

Query: 219 PPTLKSLNVQLETCLEQLVEKGISLGAIGSQQVFTTLNKWHGINTALCRI-IDTRTALPV 43
           PPTL +   QLETCLE + +KGI LGAI S Q+F+TLNKWH ++T L RI +   + + +
Sbjct: 90  PPTLSNCKTQLETCLESMTQKGIQLGAITSSQIFSTLNKWHRLDTVLRRILLQNNSNIAL 149

Query: 42  SGSRSVSKRNDKV 4
               ++SK +  V
Sbjct: 150 KSRNAISKVSSSV 162


>ref|NP_180692.3| embryo defective 1381 protein [Arabidopsis thaliana]
           gi|330253435|gb|AEC08529.1| embryo defective 1381
           protein [Arabidopsis thaliana]
          Length = 559

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/51 (58%), Positives = 38/51 (74%)
 Frame = -2

Query: 219 PPTLKSLNVQLETCLEQLVEKGISLGAIGSQQVFTTLNKWHGINTALCRII 67
           PP L +   QLE CLE +  K I LG+I SQQ+FTT+NKW+G+NTAL RI+
Sbjct: 90  PPLLSNCKTQLENCLESMSHKAIKLGSISSQQIFTTMNKWYGLNTALRRIL 140


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