BLASTX nr result
ID: Coptis23_contig00029298
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029298 (238 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258... 77 1e-12 ref|XP_004156093.1| PREDICTED: uncharacterized protein LOC101225... 75 4e-12 ref|XP_004140245.1| PREDICTED: uncharacterized protein LOC101218... 75 4e-12 ref|XP_002302858.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-11 ref|NP_180692.3| embryo defective 1381 protein [Arabidopsis thal... 69 4e-10 >ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258570 [Vitis vinifera] gi|297739214|emb|CBI28865.3| unnamed protein product [Vitis vinifera] Length = 565 Score = 77.4 bits (189), Expect = 1e-12 Identities = 41/73 (56%), Positives = 50/73 (68%) Frame = -2 Query: 219 PPTLKSLNVQLETCLEQLVEKGISLGAIGSQQVFTTLNKWHGINTALCRIIDTRTALPVS 40 PP+L +L QLE CLE + EK + LG I SQQ+FTTLNKWH +NTAL RII++ S Sbjct: 90 PPSLTNLRTQLELCLESMAEKAVRLGTISSQQIFTTLNKWHSLNTALRRIIESNK----S 145 Query: 39 GSRSVSKRNDKVS 1 S +VS DKVS Sbjct: 146 SSNAVS---DKVS 155 >ref|XP_004156093.1| PREDICTED: uncharacterized protein LOC101225211 [Cucumis sativus] Length = 563 Score = 75.5 bits (184), Expect = 4e-12 Identities = 34/68 (50%), Positives = 48/68 (70%) Frame = -2 Query: 219 PPTLKSLNVQLETCLEQLVEKGISLGAIGSQQVFTTLNKWHGINTALCRIIDTRTALPVS 40 PP+L + ++LE+CLE + EKG+ LG+I S Q+FTT+NKWHG+NTAL R++ A Sbjct: 90 PPSLSNCRIKLESCLESMAEKGVKLGSITSHQIFTTMNKWHGLNTALRRVLQVDNA---- 145 Query: 39 GSRSVSKR 16 R VS+R Sbjct: 146 SKRVVSRR 153 >ref|XP_004140245.1| PREDICTED: uncharacterized protein LOC101218685 [Cucumis sativus] Length = 541 Score = 75.5 bits (184), Expect = 4e-12 Identities = 34/68 (50%), Positives = 48/68 (70%) Frame = -2 Query: 219 PPTLKSLNVQLETCLEQLVEKGISLGAIGSQQVFTTLNKWHGINTALCRIIDTRTALPVS 40 PP+L + ++LE+CLE + EKG+ LG+I S Q+FTT+NKWHG+NTAL R++ A Sbjct: 90 PPSLSNCRIKLESCLESMAEKGVKLGSITSHQIFTTMNKWHGLNTALRRVLQVDNA---- 145 Query: 39 GSRSVSKR 16 R VS+R Sbjct: 146 SKRVVSRR 153 >ref|XP_002302858.1| predicted protein [Populus trichocarpa] gi|222844584|gb|EEE82131.1| predicted protein [Populus trichocarpa] Length = 567 Score = 71.6 bits (174), Expect = 6e-11 Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%) Frame = -2 Query: 219 PPTLKSLNVQLETCLEQLVEKGISLGAIGSQQVFTTLNKWHGINTALCRI-IDTRTALPV 43 PPTL + QLETCLE + +KGI LGAI S Q+F+TLNKWH ++T L RI + + + + Sbjct: 90 PPTLSNCKTQLETCLESMTQKGIQLGAITSSQIFSTLNKWHRLDTVLRRILLQNNSNIAL 149 Query: 42 SGSRSVSKRNDKV 4 ++SK + V Sbjct: 150 KSRNAISKVSSSV 162 >ref|NP_180692.3| embryo defective 1381 protein [Arabidopsis thaliana] gi|330253435|gb|AEC08529.1| embryo defective 1381 protein [Arabidopsis thaliana] Length = 559 Score = 68.9 bits (167), Expect = 4e-10 Identities = 30/51 (58%), Positives = 38/51 (74%) Frame = -2 Query: 219 PPTLKSLNVQLETCLEQLVEKGISLGAIGSQQVFTTLNKWHGINTALCRII 67 PP L + QLE CLE + K I LG+I SQQ+FTT+NKW+G+NTAL RI+ Sbjct: 90 PPLLSNCKTQLENCLESMSHKAIKLGSISSQQIFTTMNKWYGLNTALRRIL 140