BLASTX nr result

ID: Coptis23_contig00029297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029297
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002323227.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002308874.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250...    93   3e-17
ref|XP_003624931.1| hypothetical protein MTR_7g089140 [Medicago ...    89   3e-16

>ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|222867860|gb|EEF04991.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/93 (56%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
 Frame = -3

Query: 271 MNPSVV--EEGLPSPPLDEGAFLATPTTSLELSRFFESMDDDGNLRNCGEFNMNSENERT 98
           +NPSVV  EEGLPSPPLDEGAF AT  TS+ELS+FF+ MDDDGN RN GEF  N  + R 
Sbjct: 257 VNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFFDGMDDDGNPRNNGEFIKNHVSRRR 316

Query: 97  ATLQNQTFPTRMMQ-PNHEVVGSKENERQDMRK 2
            + +NQ    +  Q P    + SK+NE Q MRK
Sbjct: 317 PSAENQNISKQKQQTPKGANMPSKDNESQQMRK 349


>ref|XP_002323227.1| predicted protein [Populus trichocarpa] gi|222867857|gb|EEF04988.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/93 (56%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
 Frame = -3

Query: 271 MNPSVV--EEGLPSPPLDEGAFLATPTTSLELSRFFESMDDDGNLRNCGEFNMNSENERT 98
           +NPSVV  EEGLPSPPLDEGAF AT  TS+ELS+FF+ MDDDGN RN GEF  N  + R 
Sbjct: 263 VNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFFDGMDDDGNPRNNGEFIKNHVSRRR 322

Query: 97  ATLQNQTFPTRMMQ-PNHEVVGSKENERQDMRK 2
            + +NQ    +  Q P    + SK+NE Q MRK
Sbjct: 323 PSAENQNISKQKQQTPKGANMPSKDNESQQMRK 355


>ref|XP_002308874.1| predicted protein [Populus trichocarpa] gi|222854850|gb|EEE92397.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
 Frame = -3

Query: 271 MNPSVV--EEGLPSPPLDEGAFLATPTTSLELSRFFESMDDDGNLRNCGEFNMNSENERT 98
           +NPSVV  EEGLPSPPLDEGAF AT  TS+ELS+FF+ MDDDGN RN GEF  N E+ + 
Sbjct: 263 VNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFFDGMDDDGNPRNGGEFIKNRESGQR 322

Query: 97  ATLQNQTFPTRMMQ-PNHEVVGSKENERQDMRK 2
            +++ Q F  +    PN   V SK+N+ Q MR+
Sbjct: 323 PSVEKQNFAKQKQHTPNGANVLSKDNKSQQMRR 355


>ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
          Length = 521

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 5/95 (5%)
 Frame = -3

Query: 271 MNPSVV-----EEGLPSPPLDEGAFLATPTTSLELSRFFESMDDDGNLRNCGEFNMNSEN 107
           +NPSVV     EEGLP PP+DE +FL T  TSLELS+FF+ MDDDGN RN GEFN N EN
Sbjct: 223 VNPSVVDDDDDEEGLPFPPMDELSFLTTQPTSLELSQFFDGMDDDGNPRNNGEFNRNREN 282

Query: 106 ERTATLQNQTFPTRMMQPNHEVVGSKENERQDMRK 2
            R   L+NQ    R  Q   E  G  +++ Q ++K
Sbjct: 283 GRKPALENQNISKRKQQLPDEANGVTKDKGQQIKK 317


>ref|XP_003624931.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
           gi|355499946|gb|AES81149.1| hypothetical protein
           MTR_7g089140 [Medicago truncatula]
          Length = 302

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
 Frame = -3

Query: 268 NPSVVEE------GLPSPPLDEGAFLATPTTSLELSRFFESMDDDGNLRNCGEFNMNSEN 107
           NPSVVE       GLPSPPLDEGAF   PT ++ELS+FF+ MDDDGN+R    FN N +N
Sbjct: 85  NPSVVENEEEEEGGLPSPPLDEGAFFVAPTGTIELSQFFDGMDDDGNIRKSAPFNKNRDN 144

Query: 106 ERTATLQNQTFPTRMMQPNHE-VVGSKENERQDMRK 2
            R   L  QT   R    ++E  V +K+N+ Q M+K
Sbjct: 145 GRKPALGTQTKDKRNFPASNETAVTAKDNKSQHMKK 180


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