BLASTX nr result

ID: Coptis23_contig00029289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029289
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539850.1| PREDICTED: uncharacterized protein LOC100815...    64   1e-08
ref|XP_002874049.1| predicted protein [Arabidopsis lyrata subsp....    64   1e-08
dbj|BAD43140.1| unknown protein [Arabidopsis thaliana]                 64   1e-08
ref|NP_680198.1| uncharacterized protein [Arabidopsis thaliana] ...    64   1e-08
ref|NP_001242895.1| uncharacterized protein LOC100817151 [Glycin...    63   2e-08

>ref|XP_003539850.1| PREDICTED: uncharacterized protein LOC100815577 [Glycine max]
          Length = 357

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 45/117 (38%), Positives = 62/117 (52%)
 Frame = -2

Query: 423 MENEEKIWSEQVENLVDTGNIDEAISLLETENPTPDLKQLSCALTDLANLYASRGFSXXX 244
           ME   + WSE VE+LVD G+++ AISLLE+   T +    + AL+DLANLY+SRGFS   
Sbjct: 1   MEKGIQNWSESVEDLVDAGDVESAISLLESVAETLNPSDSASALSDLANLYSSRGFS--- 57

Query: 243 XXXXXXXXXXXXXXXXXLKSDELQTRAFLVKQRAQEIQQPSSRDVENVEKKDVEKIT 73
                            LK+D L +RA L+KQ       P+ R  +  ++  V K T
Sbjct: 58  -----------------LKADHLLSRASLLKQ-LHHSNTPAERVPKESKEDGVVKST 96


>ref|XP_002874049.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319886|gb|EFH50308.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 384

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 14/123 (11%)
 Frame = -2

Query: 411 EKIWSEQVENLVDTGNIDEAISLLET--------------ENPTPDLKQLSCALTDLANL 274
           E  WSE+VE+LV  G++  AIS LE+                 T  + QL+ ALT LA+L
Sbjct: 14  EPNWSERVEDLVAAGDVTAAISFLESLETNLQSRLGSSSSSERTEFVLQLAAALTQLADL 73

Query: 273 YASRGFSXXXXXXXXXXXXXXXXXXXXLKSDELQTRAFLVKQRAQEIQQPSSRDVENVEK 94
           Y+S+G S                    LKSDEL+ R+ L+KQRA +  + SSRD  +VE 
Sbjct: 74  YSSQGLS--------------------LKSDELRIRSSLIKQRALDCDRASSRDSGDVEN 113

Query: 93  KDV 85
           + +
Sbjct: 114 QSI 116


>dbj|BAD43140.1| unknown protein [Arabidopsis thaliana]
          Length = 383

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
 Frame = -2

Query: 411 EKIWSEQVENLVDTGNIDEAISLLETENPTPDLK--------------QLSCALTDLANL 274
           E  WSE+VE+LV  G++  AIS LE+       +              QLS ALT LA+L
Sbjct: 15  EPNWSERVEDLVVAGDVTAAISFLESLETNLQSRLGSSSSGERTEFGLQLSAALTQLADL 74

Query: 273 YASRGFSXXXXXXXXXXXXXXXXXXXXLKSDELQTRAFLVKQRAQEIQQPSSRDVENVEK 94
           Y+S G S                    LKSDEL+TR+ L+KQRA +    SSR   NVE 
Sbjct: 75  YSSEGLS--------------------LKSDELRTRSSLIKQRALDCDLASSRSSGNVEN 114

Query: 93  KDV 85
           + V
Sbjct: 115 QSV 117


>ref|NP_680198.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13374871|emb|CAC34505.1| putative protein
           [Arabidopsis thaliana] gi|20147370|gb|AAM10395.1|
           At5g22100/At5g22100 [Arabidopsis thaliana]
           gi|23506189|gb|AAN31106.1| At5g22100 [Arabidopsis
           thaliana] gi|51968978|dbj|BAD43181.1| unknown protein
           [Arabidopsis thaliana] gi|51969018|dbj|BAD43201.1|
           unknown protein [Arabidopsis thaliana]
           gi|332005602|gb|AED92985.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 383

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
 Frame = -2

Query: 411 EKIWSEQVENLVDTGNIDEAISLLETENPTPDLK--------------QLSCALTDLANL 274
           E  WSE+VE+LV  G++  AIS LE+       +              QLS ALT LA+L
Sbjct: 15  EPNWSERVEDLVVAGDVTAAISFLESLETNLQSRLGSSSSGERTEFGLQLSAALTQLADL 74

Query: 273 YASRGFSXXXXXXXXXXXXXXXXXXXXLKSDELQTRAFLVKQRAQEIQQPSSRDVENVEK 94
           Y+S G S                    LKSDEL+TR+ L+KQRA +    SSR   NVE 
Sbjct: 75  YSSEGLS--------------------LKSDELRTRSSLIKQRALDCDLASSRSSGNVEN 114

Query: 93  KDV 85
           + V
Sbjct: 115 QSV 117


>ref|NP_001242895.1| uncharacterized protein LOC100817151 [Glycine max]
           gi|255642348|gb|ACU21438.1| unknown [Glycine max]
          Length = 366

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 8/100 (8%)
 Frame = -2

Query: 423 MENEEKI--WSEQVENLVDTGNIDEAISLL----ETENPTPDLKQ--LSCALTDLANLYA 268
           ME E+ I  WSE VE+LVD G+++ AISLL    ET NP+    Q  L+ AL+DLANLY+
Sbjct: 1   MEKEKGIENWSEAVEDLVDAGDVESAISLLESVVETLNPSDSASQLPLASALSDLANLYS 60

Query: 267 SRGFSXXXXXXXXXXXXXXXXXXXXLKSDELQTRAFLVKQ 148
           S+GFS                    LK+D L +RA ++KQ
Sbjct: 61  SKGFS--------------------LKADHLHSRASVLKQ 80


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