BLASTX nr result

ID: Coptis23_contig00029286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029286
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536856.1| PREDICTED: uncharacterized protein LOC100775...    76   3e-12
ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
gb|ABK92443.1| unknown [Populus trichocarpa]                           74   1e-11
ref|XP_003520765.1| PREDICTED: uncharacterized protein LOC100798...    66   3e-09
ref|XP_002279985.1| PREDICTED: uncharacterized protein LOC100253...    63   3e-08

>ref|XP_003536856.1| PREDICTED: uncharacterized protein LOC100775788 [Glycine max]
          Length = 407

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/72 (50%), Positives = 49/72 (68%)
 Frame = +2

Query: 8   WTFTLVIVYFALGTIISAHGCWQYLKTPVVGNQERDEFLKRHSEDSQPRTTITSKTNEVG 187
           WTFTLV++YFALGTIISAHGCWQY+  P + N E  EFL+R  E+S    +I  +  E  
Sbjct: 183 WTFTLVMIYFALGTIISAHGCWQYINKPPLQNGEMAEFLRRDLEES--TNSIAYREKETK 240

Query: 188 NTVTLQRHHEEE 223
           +++ LQ  + +E
Sbjct: 241 SSIRLQSQYIQE 252


>ref|XP_002301538.1| predicted protein [Populus trichocarpa] gi|222843264|gb|EEE80811.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 8   WTFTLVIVYFALGTIISAHGCWQYLKTPVVGNQ-ERDEFLKRHSEDSQPRTTITSKTNEV 184
           WTF L+++YFALGT+ISA+GCW  LK P V    E   FLKR  E+    T+IT K  + 
Sbjct: 93  WTFMLIMIYFALGTVISAYGCWVSLKQPAVSEHGENSVFLKRDVEEDATATSITYKEKKS 152

Query: 185 GNTVTLQRHHEEE 223
           G T+ L+ H  EE
Sbjct: 153 GGTIKLRSHCAEE 165


>gb|ABK92443.1| unknown [Populus trichocarpa]
          Length = 320

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 8   WTFTLVIVYFALGTIISAHGCWQYLKTPVVGNQ-ERDEFLKRHSEDSQPRTTITSKTNEV 184
           WTF L+++YFALGT+ISA+GCW  LK P V    E   FLKR  E+    T+IT K  + 
Sbjct: 93  WTFMLIMIYFALGTVISAYGCWVSLKQPAVSEHGENSVFLKRDVEEDGTATSITYKEKKS 152

Query: 185 GNTVTLQRHHEEE 223
           G T+ L+ H  EE
Sbjct: 153 GGTIKLRSHCAEE 165


>ref|XP_003520765.1| PREDICTED: uncharacterized protein LOC100798827 [Glycine max]
          Length = 210

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/58 (50%), Positives = 39/58 (67%)
 Frame = +2

Query: 8   WTFTLVIVYFALGTIISAHGCWQYLKTPVVGNQERDEFLKRHSEDSQPRTTITSKTNE 181
           WTF LV +YFALGTI+SA+GCW++   PV+ N  + EFL+R  E++     ITS   E
Sbjct: 23  WTFILVTIYFALGTIVSAYGCWRFFNKPVIHNGAKAEFLRRDVEETISTNLITSNKLE 80


>ref|XP_002279985.1| PREDICTED: uncharacterized protein LOC100253796 [Vitis vinifera]
           gi|297744042|emb|CBI37012.3| unnamed protein product
           [Vitis vinifera]
          Length = 336

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +2

Query: 8   WTFTLVIVYFALGTIISAHGCWQYLKTPVVGNQERDEFLKRHSEDSQPRTTITSKTNEVG 187
           WTF+LVIVYFALG+ +SA+GCW Y   P   N   ++      E+S+  T +  +  E+ 
Sbjct: 115 WTFSLVIVYFALGSCMSAYGCWVYSMKPPSENGVTEDL-----EESRSSTAVIFRAKEIR 169

Query: 188 NTVTLQRHHEEE 223
            T+ LQ H+++E
Sbjct: 170 GTIKLQSHYDQE 181


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