BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029281
         (1571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548489.1| PREDICTED: B3 domain-containing transcriptio...   149   2e-33
ref|XP_003622665.1| B3 domain-containing protein [Medicago trunc...   139   2e-30
ref|XP_003598031.1| B3 domain-containing protein [Medicago trunc...   128   5e-27
ref|XP_003598025.1| B3 domain-containing protein [Medicago trunc...   126   1e-26
ref|XP_003598030.1| B3 domain-containing protein [Medicago trunc...   122   3e-25

>ref|XP_003548489.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
            [Glycine max]
          Length = 363

 Score =  149 bits (376), Expect = 2e-33
 Identities = 115/373 (30%), Positives = 167/373 (44%), Gaps = 54/373 (14%)
 Frame = +3

Query: 285  KGFEFYKIITSSIFQDQRIALPMKFVQKFGNDLSNVAHLKVQGGGKWIVEMRKNDGKIFF 464
            K F F+KIIT+   QD ++ +P KFV+K+G  L N   LK   G +W   + K+DGKI+F
Sbjct: 13   KPFHFFKIITAQNLQDGKLMIPNKFVEKYGEGLPNALFLKTPNGTEWNFNLEKHDGKIWF 72

Query: 465  QIGWQEFVEYYSISTGHFLVFKYNGASDFRVLIFDMTACEISYPDEETDDVMLDSXXXXX 644
            Q GW+EF EY+S++ GH LVF+ +G S F+V IFD+++ EI YP + T+     +     
Sbjct: 73   QKGWKEFAEYHSLAHGHLLVFRRHGTSHFQVHIFDLSSLEIDYPSKGTEGKTSPNHEGNK 132

Query: 645  XXXXXRGL------SVRTQKRNKANLLL-------------------------------- 710
                   L       VR+ K  K   ++                                
Sbjct: 133  QPRNEENLEYLQPYQVRSHKSVKVENMMTLPEEAQPHTDTKFKEKSKVVVANQVTALDLA 192

Query: 711  SEMKLKNPAFRVIMRPSYVKGVCCYSILPLSFVNRYLKNDLTSLTLVTSDGHKRLVGCRV 890
            S  K  NP F V+MRPSY++     +  PL    ++ +     L       +KR +  +V
Sbjct: 193  SSFKPCNPFFLVVMRPSYIQS----NGGPLPLQTKFCRRHFGLL-------NKRHINLQV 241

Query: 891  YKGH---------------SAQITEGWKTFAEENHLRVGDVCVFEMIKKDPL-LKVHIFP 1022
              G                + ++T GWKTF ++N+L+VG+VC FE+I    L L VHIF 
Sbjct: 242  LNGRIWPAKYMIQKMKNKTNFRLTSGWKTFVKDNNLKVGNVCTFELIDGTKLTLLVHIF- 300

Query: 1023 KGEATSPTILNMEDGHASSAKQGECVLPIDERHSCAKAYVSPAVNNKALKASNTLKLDHP 1202
                         +G   S  QG+         S AKA         AL  +++ K  +P
Sbjct: 301  ----------RGTNGSNCSTSQGK---------SKAKAN-----QVTALDRASSFKPCNP 336

Query: 1203 SFKFVMRSSYARS 1241
             F  VMR SY  S
Sbjct: 337  FFLVVMRHSYIHS 349



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 42/277 (15%)
 Frame = +3

Query: 789  ILPLSFVNRYLKNDLTSLTLVTSDGHKRLVGCRVYKGHSAQITEGWKTFAEENHLRVGDV 968
            ++P  FV +Y +    +L L T +G +       + G      +GWK FAE + L  G +
Sbjct: 32   MIPNKFVEKYGEGLPNALFLKTPNGTEWNFNLEKHDG-KIWFQKGWKEFAEYHSLAHGHL 90

Query: 969  CVFEMIKKDPLLKVHIF---------PKGEATSPTILNMEDG------------------ 1067
             VF         +VHIF         P       T  N E                    
Sbjct: 91   LVFRRHGTSHF-QVHIFDLSSLEIDYPSKGTEGKTSPNHEGNKQPRNEENLEYLQPYQVR 149

Query: 1068 -HASSAKQGECVLPIDERHSC-----AKAYVSPAVNNKALKASNTLKLDHPSFKFVMRSS 1229
             H S   +    LP + +         K+ V  A    AL  +++ K  +P F  VMR S
Sbjct: 150  SHKSVKVENMMTLPEEAQPHTDTKFKEKSKVVVANQVTALDLASSFKPCNPFFLVVMRPS 209

Query: 1230 YARS-GYPVPMY--FINTYLQGGYNS--VRLKVSDGQTWSVRWLA----NQYGVRLGSGW 1382
            Y +S G P+P+   F   +  G  N   + L+V +G+ W  +++     N+   RL SGW
Sbjct: 210  YIQSNGGPLPLQTKFCRRHF-GLLNKRHINLQVLNGRIWPAKYMIQKMKNKTNFRLTSGW 268

Query: 1383 AQFVRENNVKERDVCVCELINKKDLMFKVYIFQEMEG 1493
              FV++NN+K  +VC  ELI+   L   V+IF+   G
Sbjct: 269  KTFVKDNNLKVGNVCTFELIDGTKLTLLVHIFRGTNG 305


>ref|XP_003622665.1| B3 domain-containing protein [Medicago truncatula]
            gi|355497680|gb|AES78883.1| B3 domain-containing protein
            [Medicago truncatula]
          Length = 315

 Score =  139 bits (351), Expect = 2e-30
 Identities = 91/278 (32%), Positives = 138/278 (49%), Gaps = 37/278 (13%)
 Frame = +3

Query: 297  FYKIITSSIFQDQRIALPMKFVQKFGNDLSNVAHLKVQGGGKWIVEMRKNDGKIFFQIGW 476
            F+KII +    + ++ +P KFV+K+G  L     LK   GGKW + + K+DGKI+F+ GW
Sbjct: 13   FFKIILAQNLHEGKLMMPRKFVEKYGKSLPKETCLKTPNGGKWKLNLVKSDGKIWFEKGW 72

Query: 477  QEFVEYYSISTGHFLVFKYNGASDFRVLIFDMTACEISYPDE--ETDDVMLDSXXXXXXX 650
            ++F E++S++ GH L+F+Y   S+F V IF+ +A E +YP +  E   +  D        
Sbjct: 73   KQFAEHHSLAHGHLLLFRYEKTSNFEVHIFEKSALETNYPSKRVEAKTISNDQGNESLNG 132

Query: 651  XXXRGLSVR-----------------TQKRNKANLLLS------------EMKLKNPAFR 743
               R    R                 +QK++K   +++              K++NP+F 
Sbjct: 133  ENCRAAQKRKANSFEFGSSSCVKVGKSQKKSKGKQVITAAEKVTTLERAKSFKIRNPSFV 192

Query: 744  VIMRPSYVKGVCCYSILPLSFVNRYL-----KNDLTSLTLVTSDGHKRLVGCRVYKGHSA 908
            V+MR SYV+     +I P  F NR+      + D+    L       R    +   G   
Sbjct: 193  VVMRASYVEHKFLMNI-PRKFGNRHFDLDKKRGDIHFQVLNEGVWPTRFSIRKSRTGLQF 251

Query: 909  QITEGWKTFAEENHLRVGDVCVFEMIKKDPL-LKVHIF 1019
            +IT GWK FAE+N L+VGDVC FE+I    L   VHIF
Sbjct: 252  EITGGWKAFAEDNKLKVGDVCKFELISCTILTFIVHIF 289



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 74/285 (25%), Positives = 121/285 (42%), Gaps = 34/285 (11%)
 Frame = +3

Query: 738  FRVIMRPSYVKGVCCYSILPLSFVNRYLKNDLTSLTLVTSDGHKRLVGCRVYKGHSAQIT 917
            F++I+  +  +G     ++P  FV +Y K+      L T +G K  +   V         
Sbjct: 14   FKIILAQNLHEGKL---MMPRKFVEKYGKSLPKETCLKTPNGGKWKLNL-VKSDGKIWFE 69

Query: 918  EGWKTFAEENHLRVGDVCVFEMIKKDPLLKVHIFPKG--EATSPT--------------- 1046
            +GWK FAE + L  G + +F   +K    +VHIF K   E   P+               
Sbjct: 70   KGWKQFAEHHSLAHGHLLLFRY-EKTSNFEVHIFEKSALETNYPSKRVEAKTISNDQGNE 128

Query: 1047 ILNMEDGHASSAKQGE--------CV-LPIDERHSCAKAYVSPAVNNKALKASNTLKLDH 1199
             LN E+  A+  ++          CV +   ++ S  K  ++ A     L+ + + K+ +
Sbjct: 129  SLNGENCRAAQKRKANSFEFGSSSCVKVGKSQKKSKGKQVITAAEKVTTLERAKSFKIRN 188

Query: 1200 PSFKFVMRSSYARSGY--PVPMYFINTY--LQGGYNSVRLKVSDGQTW----SVRWLANQ 1355
            PSF  VMR+SY    +   +P  F N +  L      +  +V +   W    S+R     
Sbjct: 189  PSFVVVMRASYVEHKFLMNIPRKFGNRHFDLDKKRGDIHFQVLNEGVWPTRFSIRKSRTG 248

Query: 1356 YGVRLGSGWAQFVRENNVKERDVCVCELINKKDLMFKVYIFQEME 1490
                +  GW  F  +N +K  DVC  ELI+   L F V+IF+E +
Sbjct: 249  LQFEITGGWKAFAEDNKLKVGDVCKFELISCTILTFIVHIFRETD 293


>ref|XP_003598031.1| B3 domain-containing protein [Medicago truncatula]
            gi|355487079|gb|AES68282.1| B3 domain-containing protein
            [Medicago truncatula]
          Length = 265

 Score =  128 bits (321), Expect = 5e-27
 Identities = 90/258 (34%), Positives = 133/258 (51%), Gaps = 11/258 (4%)
 Frame = +3

Query: 279  KKKGFEFYKIITSSIFQDQRIALPMKFVQKFGNDLSNVAHLKVQGGGKWIVEMRKNDGKI 458
            +K    F K I  S   D +I +P  F+++FGN+L NVA + V  G  W +E++K    +
Sbjct: 15   EKDSKHFMKAILPSPIHDTQIRIPDGFIKRFGNELKNVATITVPDGCDWEMELKKCGNDV 74

Query: 459  FFQIGWQEFVEYYSISTGHFLVFKYNGASDFRVLIFDMTACEISYP------DEETDDVM 620
            +F   WQ+F EYYSI  G FL FKY G S F V+IFD+T+ EI YP      + ET+   
Sbjct: 75   YFCNKWQQFAEYYSIGYGSFLRFKYEGDSKFNVVIFDVTSVEICYPFKTQSINGETNTKC 134

Query: 621  LDSXXXXXXXXXXRGLSVRTQKRNKANLLLSEMKLKNPAF-RVIMRPSYVKGVCCYSILP 797
                            S R+++  K      E   KNP F   I++  YV        + 
Sbjct: 135  HSPRKRSKVETSDNHASKRSEEAAK------EFNPKNPYFCSKILKRKYV-------YVN 181

Query: 798  LSFVNRYLKNDLTSLTLVTSDGHKRLVGCRVYKGHSA---QITEGWKTFAEENHLRVGDV 968
              F ++YLK ++  + + TS G +  V   ++  +S+   +IT G+  F  +N+L  GD 
Sbjct: 182  ADFASKYLKPNV-PIKIQTSHGEQWEVFGILHDANSSSAMKITRGFSIFQRDNNLSHGDY 240

Query: 969  CVFEMIKKDPL-LKVHIF 1019
            CVFE+IK +PL LKV +F
Sbjct: 241  CVFELIKNNPLVLKVTMF 258


>ref|XP_003598025.1| B3 domain-containing protein [Medicago truncatula]
            gi|355487073|gb|AES68276.1| B3 domain-containing protein
            [Medicago truncatula]
          Length = 523

 Score =  126 bits (317), Expect = 1e-26
 Identities = 88/275 (32%), Positives = 130/275 (47%), Gaps = 13/275 (4%)
 Frame = +3

Query: 234  PHHRHVDAPQTRTGKKKKGFEFYKIITSSIFQDQRIALPMKFVQKFGNDLSNVAHLKVQG 413
            P  R V +   +  ++ K F+  K I  S   D+ I +P  F+  FGN+L  VA + V  
Sbjct: 251  PQGRSVQSMTEKEVRESKHFK--KAILPSPIHDKEIRIPEDFITMFGNELEKVATVTVPD 308

Query: 414  GGKWIVEMRKNDGKIFFQIGWQEFVEYYSISTGHFLVFKYNGASDFRVLIFDMTACEISY 593
            G  W + ++K    IFF   W+EF +YYS+  G +L FKY G S F V+IFD+T  EI Y
Sbjct: 309  GRDWKMRLKKRGNDIFFSNEWEEFAKYYSLGYGCYLSFKYEGNSKFSVIIFDVTYVEICY 368

Query: 594  ----------PDEETDDVMLDSXXXXXXXXXXRGLSVRTQKRNKANLLLSEMKLKNPAFR 743
                      P+ +       S          +  SV      +A +  +E K KNP F 
Sbjct: 369  PLKTPSVNGEPNTKCASPTKRSKVETSECHGKKAKSVSKHASTRAEVAANEFKPKNPYFC 428

Query: 744  VIMRPSYVKGVCCYSILPLSFVNRYLKNDLTSLTLVTSDGHKRLVGC--RVYKGHSAQIT 917
             I+          Y+ +P  F  +YLK  + +  L  SDG +  V C        S +I 
Sbjct: 429  SIIAKQN------YTYIPRDFAEKYLKPKVPT-KLQNSDGKQWEVFCVPNTVGSSSMRIV 481

Query: 918  EGWKTFAEENHLRVGDVCVFEMIKKDP-LLKVHIF 1019
            +G+  F  +N+L   D CV+E+IKK P +L+V +F
Sbjct: 482  KGFSNFVTDNNLSHRDYCVYELIKKKPVVLEVTMF 516



 Score =  105 bits (263), Expect = 3e-20
 Identities = 84/270 (31%), Positives = 127/270 (47%), Gaps = 7/270 (2%)
 Frame = +3

Query: 228  MRPHHRHVDAPQTRTGKKKKGFEFYKIITSSIFQDQRIALPMKFVQKFGNDLSNVAHLKV 407
            M+PH R           +K    F K I       + I +P +F+++FGN+L NVA + V
Sbjct: 1    MQPHRRRCGRSPA---PEKASKHFMKAILPPPDHTKEIRIPNEFIKRFGNELKNVATITV 57

Query: 408  QGGG-KWIVEMRKNDGKIFFQIGWQEFVEYYSISTGHFLVFKYNGASDFRVLIFDMTACE 584
              G  +W + ++K    +F    WQ+F EYY I  G +L F Y G S F V+I+D T+ E
Sbjct: 58   PDGRHEWEMGLKKCGEHVFLSNNWQQFAEYYCIYYGCYLDFNYQGNSKFNVVIYDTTSVE 117

Query: 585  ISY----PDEETDDVMLDSXXXXXXXXXXRGLSVRTQKRNKANLLLSEMKLKNPAFRVIM 752
            ISY    P    D                +G +  +++ N A    SE   KNP F    
Sbjct: 118  ISYSFKTPSTNGDQ-------------RIKGPNSASKRENCA---ASEFNPKNPYFYSKS 161

Query: 753  RPSYVKGVCCYSILPLSFVNRYLKNDLTSLTLVTSDGHKRLVGCRVY-KGHS-AQITEGW 926
               +      Y+ +P  F  +YL   +    L  S G +  V C ++ KG+S  +IT G+
Sbjct: 162  NRGF------YAYVPSIFAEKYLTLKV-PFKLQNSQGKQWEVYCVLHNKGNSQMRITGGF 214

Query: 927  KTFAEENHLRVGDVCVFEMIKKDPLLKVHI 1016
              FA EN+L  G   VFE+IK+ P++ + +
Sbjct: 215  GKFARENNLLEGVTYVFELIKRKPVVVLQV 244



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
 Frame = +3

Query: 1113 ERHSCAKAYVSPAVNNKALKASNTLKLDHPSFKFVMRSSYARSGYP-VPMYFINTYLQGG 1289
            E H      VS   + +A  A+N  K  +P F  ++    A+  Y  +P  F   YL+  
Sbjct: 396  ECHGKKAKSVSKHASTRAEVAANEFKPKNPYFCSII----AKQNYTYIPRDFAEKYLKPK 451

Query: 1290 YNSVRLKVSDGQTWSVRWLANQYG---VRLGSGWAQFVRENNVKERDVCVCELINKKDLM 1460
              + +L+ SDG+ W V  + N  G   +R+  G++ FV +NN+  RD CV ELI KK ++
Sbjct: 452  VPT-KLQNSDGKQWEVFCVPNTVGSSSMRIVKGFSNFVTDNNLSHRDYCVYELIKKKPVV 510

Query: 1461 FKVYIFQEME 1490
             +V +F+ ++
Sbjct: 511  LEVTMFRAVD 520


>ref|XP_003598030.1| B3 domain-containing protein [Medicago truncatula]
            gi|357455503|ref|XP_003598032.1| B3 domain-containing
            protein [Medicago truncatula] gi|355487078|gb|AES68281.1|
            B3 domain-containing protein [Medicago truncatula]
            gi|355487080|gb|AES68283.1| B3 domain-containing protein
            [Medicago truncatula]
          Length = 266

 Score =  122 bits (306), Expect = 3e-25
 Identities = 82/253 (32%), Positives = 122/253 (48%), Gaps = 6/253 (2%)
 Frame = +3

Query: 279  KKKGFEFYKIITSSIFQDQRIALPMKFVQKFGNDLSNVAHLKVQGGGKWIVEMRKNDGKI 458
            +K    F K I  S   D ++ +P +F+++FGN+L NVA + V  G  W ++++K    +
Sbjct: 15   EKDSKHFMKAILPSAIHDTKLRIPDEFIKRFGNELKNVATITVPDGCDWEMKLKKCGNDV 74

Query: 459  FFQIGWQEFVEYYSISTGHFLVFKYNGASDFRVLIFDMTACEISYPDEETDDVMLDSXXX 638
            +F   WQ+F EYYSI  G FL FKY G S F V IFD T+ EI YP +            
Sbjct: 75   YFCNKWQQFAEYYSIGYGSFLCFKYEGDSKFSVFIFDATSIEICYPFKTQSTNGETKTKF 134

Query: 639  XXXXXXXRGLSVRTQKRNKANLLLSEMKLKNPAF-RVIMRPSYVKGVCCYSILPLSFVNR 815
                   +  +       +A     E   KNP F   I++ +YV        +   F ++
Sbjct: 135  HSPRKRSKVETSDNHASKRAEEAAKEFNPKNPYFCSKILKGNYV-------YVNADFASK 187

Query: 816  YLKNDLTSLTLVTSDGHKRLVGCRVYKGHSAQ----ITEGWKTFAEENHLRVGDVCVFEM 983
            +L N    + L  S G +  V C ++   S+     I+ G+  F   N+L  GD CVFE+
Sbjct: 188  HL-NPNVPIKLQNSHGKQWEVSCAMHDAKSSSTAMIISRGFPIFLRGNNLSHGDYCVFEL 246

Query: 984  IKKDP-LLKVHIF 1019
            I K P +LKV +F
Sbjct: 247  INKTPDVLKVTMF 259