BLASTX nr result

ID: Coptis23_contig00029275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029275
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557388.1| PREDICTED: nudix hydrolase 16, mitochondrial...    90   2e-16
ref|XP_002272200.1| PREDICTED: nudix hydrolase 16, mitochondrial...    90   2e-16
gb|ADE76466.1| unknown [Picea sitchensis]                              87   1e-15
gb|AFW67249.1| hypothetical protein ZEAMMB73_674797 [Zea mays]         86   2e-15
gb|AFW67247.1| hypothetical protein ZEAMMB73_674797 [Zea mays]         86   2e-15

>ref|XP_003557388.1| PREDICTED: nudix hydrolase 16, mitochondrial-like [Brachypodium
           distachyon]
          Length = 182

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/61 (73%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +3

Query: 213 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSG-ENCGGKTKQNLQVLMINSTSGPGLL 389
           M DLVARTGRL QRYEDG RLVAGCIPF+YRD+  E  GG+ K+ ++VLMINS SGPGLL
Sbjct: 1   MCDLVARTGRLQQRYEDGRRLVAGCIPFRYRDNNDETSGGEQKRLVEVLMINSQSGPGLL 60

Query: 390 F 392
           F
Sbjct: 61  F 61


>ref|XP_002272200.1| PREDICTED: nudix hydrolase 16, mitochondrial [Vitis vinifera]
           gi|147852980|emb|CAN81261.1| hypothetical protein
           VITISV_019710 [Vitis vinifera]
           gi|297739943|emb|CBI30125.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/60 (73%), Positives = 52/60 (86%)
 Frame = +3

Query: 213 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNLQVLMINSTSGPGLLF 392
           MS+LVARTGR  QRYEDG RLVAGCIPFKYR+S E+ G  +++ ++VLMINSTSGPGLLF
Sbjct: 1   MSELVARTGRHQQRYEDGCRLVAGCIPFKYRNSVESNGAASQKIVEVLMINSTSGPGLLF 60


>gb|ADE76466.1| unknown [Picea sitchensis]
          Length = 191

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/60 (66%), Positives = 47/60 (78%)
 Frame = +3

Query: 213 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNLQVLMINSTSGPGLLF 392
           M DLVARTGR  QRYEDGYRLVAGC+P++Y  + + C G TKQ L+VLMI S SGP L+F
Sbjct: 1   MGDLVARTGRHQQRYEDGYRLVAGCVPYRYTLADDTCNGNTKQRLEVLMITSQSGPRLVF 60


>gb|AFW67249.1| hypothetical protein ZEAMMB73_674797 [Zea mays]
          Length = 78

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/61 (72%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = +3

Query: 213 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYR-DSGENCGGKTKQNLQVLMINSTSGPGLL 389
           M DLVARTGR  QRYEDG RLVAGCIPF+YR ++ E  G KTK+ ++VLMINS SGPGLL
Sbjct: 1   MCDLVARTGRHQQRYEDGRRLVAGCIPFRYRANNDETSGDKTKKVVEVLMINSQSGPGLL 60

Query: 390 F 392
           F
Sbjct: 61  F 61


>gb|AFW67247.1| hypothetical protein ZEAMMB73_674797 [Zea mays]
          Length = 157

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/61 (72%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = +3

Query: 213 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYR-DSGENCGGKTKQNLQVLMINSTSGPGLL 389
           M DLVARTGR  QRYEDG RLVAGCIPF+YR ++ E  G KTK+ ++VLMINS SGPGLL
Sbjct: 1   MCDLVARTGRHQQRYEDGRRLVAGCIPFRYRANNDETSGDKTKKVVEVLMINSQSGPGLL 60

Query: 390 F 392
           F
Sbjct: 61  F 61


Top