BLASTX nr result

ID: Coptis23_contig00029273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029273
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152727.1| PREDICTED: transcriptional activator Myb-lik...    67   1e-09
ref|XP_003549412.1| PREDICTED: transcription factor MYB44-like [...    67   1e-09
ref|XP_004169452.1| PREDICTED: transcriptional activator Myb-lik...    67   2e-09
ref|XP_003603000.1| Myb transcription factor [Medicago truncatul...    63   3e-08
ref|NP_001235925.1| MYB transcription factor MYB124 [Glycine max...    60   1e-07

>ref|XP_004152727.1| PREDICTED: transcriptional activator Myb-like [Cucumis sativus]
          Length = 242

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = +1

Query: 1   NNGYSEDMNKLGVGLSLSSTFEYDPNTTLTLAPPGL------SCERRRVKEEVPSEFWDA 162
           NN      + L + +S+S   E DP T LTLAPPG+      + E RRV E  P+ FWDA
Sbjct: 160 NNNVVNIASDLKLSVSVSVPLEDDPLTALTLAPPGIGGVRTTAAEERRV-ESFPAGFWDA 218

Query: 163 MRDVIAKEVRNYVSSSFSGN 222
           MRDVIA+EVR Y++++F  N
Sbjct: 219 MRDVIAREVREYMTTTFMEN 238


>ref|XP_003549412.1| PREDICTED: transcription factor MYB44-like [Glycine max]
          Length = 209

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/59 (62%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
 Frame = +1

Query: 64  EYDPNTTLTLAPPGLSC-----ERRRVKEEVPSEFWDAMRDVIAKEVRNYVSSSFSGNV 225
           E DP T LTLAPPG  C     ERR V    P+ FWDAMRDV+A+EVR YVSSSFS N+
Sbjct: 145 EDDPLTALTLAPPGSGCCGRGEERRGVS---PAGFWDAMRDVVAREVRGYVSSSFSDNL 200


>ref|XP_004169452.1| PREDICTED: transcriptional activator Myb-like [Cucumis sativus]
          Length = 242

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = +1

Query: 1   NNGYSEDMNKLGVGLSLSSTFEYDPNTTLTLAPPGL------SCERRRVKEEVPSEFWDA 162
           NN      + L + +S+S   E DP T LTLAPPG+      + E RRV E  P+ FWDA
Sbjct: 160 NNNAVNIASDLKLSVSVSVPLEDDPLTALTLAPPGIGGVRTTAAEERRV-ESFPAGFWDA 218

Query: 163 MRDVIAKEVRNYVSSSFSGN 222
           MRDVIA+EVR Y++++F  N
Sbjct: 219 MRDVIAREVREYMTTTFMEN 238


>ref|XP_003603000.1| Myb transcription factor [Medicago truncatula]
           gi|355492048|gb|AES73251.1| Myb transcription factor
           [Medicago truncatula] gi|388499774|gb|AFK37953.1|
           unknown [Medicago truncatula]
          Length = 226

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/62 (56%), Positives = 38/62 (61%), Gaps = 9/62 (14%)
 Frame = +1

Query: 64  EYDPNTTLTLAPPGLSCERRRVK---------EEVPSEFWDAMRDVIAKEVRNYVSSSFS 216
           E DP T LTLAPPG   E R            E VP+EFWD MR VIA+EVR YVSS+FS
Sbjct: 161 EDDPLTALTLAPPGNGVEDREEMVGDHRFPSPENVPTEFWDVMRGVIAREVREYVSSNFS 220

Query: 217 GN 222
            N
Sbjct: 221 HN 222


>ref|NP_001235925.1| MYB transcription factor MYB124 [Glycine max]
           gi|110931710|gb|ABH02854.1| MYB transcription factor
           MYB124 [Glycine max]
          Length = 221

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 7/61 (11%)
 Frame = +1

Query: 61  FEYDPNTTLTLAPPGLSCERRRVKEEV-------PSEFWDAMRDVIAKEVRNYVSSSFSG 219
           FE DP T LTLAPPG++     V E+        P  FWD MRDVIA+EVR YVSS+FS 
Sbjct: 159 FEDDPLTALTLAPPGIA--NGTVAEDAVPDHRASPEGFWDMMRDVIAREVREYVSSNFSD 216

Query: 220 N 222
           N
Sbjct: 217 N 217


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