BLASTX nr result

ID: Coptis23_contig00029268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029268
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326905.1| predicted protein [Populus trichocarpa] gi|2...   348   6e-94
ref|XP_002891366.1| hypothetical protein ARALYDRAFT_473899 [Arab...   345   6e-93
ref|XP_004147798.1| PREDICTED: exocyst complex component SEC3A-l...   343   1e-92
ref|NP_175186.2| exocyst complex component sec3A [Arabidopsis th...   339   3e-91
ref|NP_001185163.1| exocyst complex component sec3A [Arabidopsis...   339   3e-91

>ref|XP_002326905.1| predicted protein [Populus trichocarpa] gi|222835220|gb|EEE73655.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  348 bits (893), Expect = 6e-94
 Identities = 183/225 (81%), Positives = 198/225 (88%), Gaps = 2/225 (0%)
 Frame = +3

Query: 12  MAKSSADDAELKRACEAAIEGTKQKIVLSIRVAKSRGIWGKSGRLSRGHMAKSRVLAISI 191
           MAKSSADD EL+RACEAAIEGTKQKIVLSIRVAKS+GIWGKSG+L R HMAK RVLA+S 
Sbjct: 1   MAKSSADDEELRRACEAAIEGTKQKIVLSIRVAKSQGIWGKSGKLGR-HMAKPRVLALST 59

Query: 192 KVKGQRTKAFLRVLK-ENGGIFEPAKLYKLKHLSKVELVSNDPSGCTFMLGFDNLRSQSV 368
           K KGQRTKAFLRVLK  NGG+ EPAKLYKLKHLSKVE+++NDPSGCTF LGFDNLRSQSV
Sbjct: 60  KSKGQRTKAFLRVLKYSNGGVLEPAKLYKLKHLSKVEVIANDPSGCTFTLGFDNLRSQSV 119

Query: 369 APPQWTMRNVDDRNRLLVCILNICKEVLARLPKVVGIDIVEMALWAKENSQNTTSVASQA 548
           APPQWTMRNVDDRNRLL CILNICK+VL RLPKVVGID+VEMALWAKE   NT +V  Q 
Sbjct: 120 APPQWTMRNVDDRNRLLFCILNICKDVLGRLPKVVGIDVVEMALWAKE---NTPTVPKQT 176

Query: 549 KLQN-GGPVAAIVAEDDLKVTVEKDLVSQAEEEDMGALLGTYVMG 680
             Q+ GGPV A V E DLKV+VE++LVSQAEEEDM ALLGTYVMG
Sbjct: 177 NQQDGGGPVEATVTESDLKVSVERELVSQAEEEDMEALLGTYVMG 221


>ref|XP_002891366.1| hypothetical protein ARALYDRAFT_473899 [Arabidopsis lyrata subsp.
           lyrata] gi|297337208|gb|EFH67625.1| hypothetical protein
           ARALYDRAFT_473899 [Arabidopsis lyrata subsp. lyrata]
          Length = 887

 Score =  345 bits (884), Expect = 6e-93
 Identities = 177/224 (79%), Positives = 196/224 (87%), Gaps = 1/224 (0%)
 Frame = +3

Query: 12  MAKSSADDAELKRACEAAIEGTKQKIVLSIRVAKSRGIWGKSGRLSRGHMAKSRVLAISI 191
           MAKSSADD EL+RACEAAIEGTKQ IV+SIRVAKSRG+WGKSG+L R  MAK RVLA+S+
Sbjct: 1   MAKSSADDEELRRACEAAIEGTKQSIVMSIRVAKSRGVWGKSGKLGR-QMAKPRVLALSV 59

Query: 192 KVKGQRTKAFLRVLK-ENGGIFEPAKLYKLKHLSKVELVSNDPSGCTFMLGFDNLRSQSV 368
           K KGQR KAFLRV+K  +GG+ EPAK+YKLKHLSKVE+++NDPSGCTF LGFDNLRSQSV
Sbjct: 60  KSKGQRKKAFLRVMKYSSGGVLEPAKMYKLKHLSKVEVITNDPSGCTFTLGFDNLRSQSV 119

Query: 369 APPQWTMRNVDDRNRLLVCILNICKEVLARLPKVVGIDIVEMALWAKENSQNTTSVASQA 548
           APPQWTMRN DDRNRLLVCILNICK+VL RLPKVVGIDIVEMALWAK+   NT  V +Q 
Sbjct: 120 APPQWTMRNTDDRNRLLVCILNICKDVLGRLPKVVGIDIVEMALWAKD---NTPVVTTQR 176

Query: 549 KLQNGGPVAAIVAEDDLKVTVEKDLVSQAEEEDMGALLGTYVMG 680
             ++GGPVA  V E DLKVTVEK+LVSQAEEEDM ALLGTYVMG
Sbjct: 177 STEDGGPVAETVTESDLKVTVEKELVSQAEEEDMEALLGTYVMG 220


>ref|XP_004147798.1| PREDICTED: exocyst complex component SEC3A-like [Cucumis sativus]
          Length = 883

 Score =  343 bits (881), Expect = 1e-92
 Identities = 179/224 (79%), Positives = 195/224 (87%), Gaps = 1/224 (0%)
 Frame = +3

Query: 12  MAKSSADDAELKRACEAAIEGTKQKIVLSIRVAKSRGIWGKSGRLSRGHMAKSRVLAISI 191
           MAKSSADDAEL+RACEAAIEGTKQK+V+SIRVAKSRGIWGKSG L R  MAK RVLA+S 
Sbjct: 1   MAKSSADDAELRRACEAAIEGTKQKVVMSIRVAKSRGIWGKSGMLGRQQMAKPRVLALST 60

Query: 192 KVKGQRTKAFLRVLK-ENGGIFEPAKLYKLKHLSKVELVSNDPSGCTFMLGFDNLRSQSV 368
           K KG RTKAFLRVLK   GG+ EPAKLYKLKHLSKVE+++NDPSGCTF LGFDNLRSQSV
Sbjct: 61  KEKGPRTKAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVIANDPSGCTFTLGFDNLRSQSV 120

Query: 369 APPQWTMRNVDDRNRLLVCILNICKEVLARLPKVVGIDIVEMALWAKENSQNTTSVASQA 548
           APPQWTMRN+DDRNRLL+CILNICK+VL RLPKVVGID+VEMALWAKE   NT +V +Q 
Sbjct: 121 APPQWTMRNIDDRNRLLLCILNICKDVLERLPKVVGIDVVEMALWAKE---NTPTVPTQR 177

Query: 549 KLQNGGPVAAIVAEDDLKVTVEKDLVSQAEEEDMGALLGTYVMG 680
             Q+ GP  A V E DLKVTVEK+LVSQAEEEDM ALLGTYVMG
Sbjct: 178 SHQD-GPAVARVTESDLKVTVEKELVSQAEEEDMEALLGTYVMG 220


>ref|NP_175186.2| exocyst complex component sec3A [Arabidopsis thaliana]
           gi|75213194|sp|Q9SX85.1|SEC3A_ARATH RecName:
           Full=Exocyst complex component SEC3A
           gi|5668806|gb|AAD46032.1|AC007519_17 Strong similarity
           to F16N3.17 from Arabidopsis thalian BAC gb|AC007519
           [Arabidopsis thaliana] gi|332194063|gb|AEE32184.1|
           exocyst complex component sec3A [Arabidopsis thaliana]
          Length = 887

 Score =  339 bits (869), Expect = 3e-91
 Identities = 175/224 (78%), Positives = 194/224 (86%), Gaps = 1/224 (0%)
 Frame = +3

Query: 12  MAKSSADDAELKRACEAAIEGTKQKIVLSIRVAKSRGIWGKSGRLSRGHMAKSRVLAISI 191
           MAKSSADD EL+RACEAAIEGTKQ IV+SIRVAKSRG+WGKSG+L R  MAK RVLA+S+
Sbjct: 1   MAKSSADDEELRRACEAAIEGTKQSIVMSIRVAKSRGVWGKSGKLGR-QMAKPRVLALSV 59

Query: 192 KVKGQRTKAFLRVLK-ENGGIFEPAKLYKLKHLSKVELVSNDPSGCTFMLGFDNLRSQSV 368
           K KG R KAFLRV+K  +GG+ EPAK+YKLKHLSKVE+++NDPSGCTF LGFDNLRSQSV
Sbjct: 60  KSKGPRKKAFLRVMKYSSGGVLEPAKMYKLKHLSKVEVITNDPSGCTFTLGFDNLRSQSV 119

Query: 369 APPQWTMRNVDDRNRLLVCILNICKEVLARLPKVVGIDIVEMALWAKENSQNTTSVASQA 548
           APPQWTMRN DDRNRLLVCILNICK+VL RLPKVVGIDIVEMALWAK+   NT  V +Q 
Sbjct: 120 APPQWTMRNTDDRNRLLVCILNICKDVLGRLPKVVGIDIVEMALWAKD---NTPVVTTQR 176

Query: 549 KLQNGGPVAAIVAEDDLKVTVEKDLVSQAEEEDMGALLGTYVMG 680
             ++G PVA  V E DLKVTVEK+LVSQAEEEDM ALLGTYVMG
Sbjct: 177 STEDGEPVAESVTESDLKVTVEKELVSQAEEEDMEALLGTYVMG 220


>ref|NP_001185163.1| exocyst complex component sec3A [Arabidopsis thaliana]
           gi|332194064|gb|AEE32185.1| exocyst complex component
           sec3A [Arabidopsis thaliana]
          Length = 888

 Score =  339 bits (869), Expect = 3e-91
 Identities = 175/224 (78%), Positives = 194/224 (86%), Gaps = 1/224 (0%)
 Frame = +3

Query: 12  MAKSSADDAELKRACEAAIEGTKQKIVLSIRVAKSRGIWGKSGRLSRGHMAKSRVLAISI 191
           MAKSSADD EL+RACEAAIEGTKQ IV+SIRVAKSRG+WGKSG+L R  MAK RVLA+S+
Sbjct: 1   MAKSSADDEELRRACEAAIEGTKQSIVMSIRVAKSRGVWGKSGKLGR-QMAKPRVLALSV 59

Query: 192 KVKGQRTKAFLRVLK-ENGGIFEPAKLYKLKHLSKVELVSNDPSGCTFMLGFDNLRSQSV 368
           K KG R KAFLRV+K  +GG+ EPAK+YKLKHLSKVE+++NDPSGCTF LGFDNLRSQSV
Sbjct: 60  KSKGPRKKAFLRVMKYSSGGVLEPAKMYKLKHLSKVEVITNDPSGCTFTLGFDNLRSQSV 119

Query: 369 APPQWTMRNVDDRNRLLVCILNICKEVLARLPKVVGIDIVEMALWAKENSQNTTSVASQA 548
           APPQWTMRN DDRNRLLVCILNICK+VL RLPKVVGIDIVEMALWAK+   NT  V +Q 
Sbjct: 120 APPQWTMRNTDDRNRLLVCILNICKDVLGRLPKVVGIDIVEMALWAKD---NTPVVTTQR 176

Query: 549 KLQNGGPVAAIVAEDDLKVTVEKDLVSQAEEEDMGALLGTYVMG 680
             ++G PVA  V E DLKVTVEK+LVSQAEEEDM ALLGTYVMG
Sbjct: 177 STEDGEPVAESVTESDLKVTVEKELVSQAEEEDMEALLGTYVMG 220


Top