BLASTX nr result

ID: Coptis23_contig00029262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029262
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269960.2| PREDICTED: BTB/POZ domain-containing protein...   381   e-103
ref|XP_002531804.1| Root phototropism protein, putative [Ricinus...   379   e-103
emb|CBI31167.3| unnamed protein product [Vitis vinifera]              372   e-101
ref|XP_002323684.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|XP_003552325.1| PREDICTED: BTB/POZ domain-containing protein...   348   1e-93

>ref|XP_002269960.2| PREDICTED: BTB/POZ domain-containing protein At3g08570-like isoform 1
            [Vitis vinifera]
          Length = 636

 Score =  381 bits (978), Expect = e-103
 Identities = 194/273 (71%), Positives = 222/273 (81%), Gaps = 7/273 (2%)
 Frame = -3

Query: 863  RPDSIITSLMHYAQTSLKGIGKNEVWDQTKINPQCGMAQNEPKVILEILVSLLPAEKSTS 684
            +PDSI+ SLMHYAQ SLKGIGK ++W  T++ P  GM +N   +I+E LVSLLPAEKS+S
Sbjct: 259  QPDSIVASLMHYAQASLKGIGKQQIWHPTRMKPSPGMVENSQCIIVETLVSLLPAEKSSS 318

Query: 683  IPLNFLFGMLRLAITVDATVACRLELERRIGFRLEMVSLDDLLIPSLRAGDPLFNVDTVH 504
            IPL+FLFGMLR+AI V A VACRLELERRIGFRLEMVSLDDLLIP ++ GD LF+VDTVH
Sbjct: 319  IPLSFLFGMLRMAILVGANVACRLELERRIGFRLEMVSLDDLLIPCVQTGDSLFDVDTVH 378

Query: 503  RILVNFLQQLEDEESEEASHFGYELEGLGSPSHGSVLKVGQLIDCYLAEIAPDPYLDLQK 324
            RILVNFLQ++E+EE+EE   +GYE E LGSPS GSVLKVG+LID YLAEIAPDPYL+LQK
Sbjct: 379  RILVNFLQRIEEEENEE---YGYESEALGSPSQGSVLKVGRLIDSYLAEIAPDPYLNLQK 435

Query: 323  FIAIIEILPDYARVTDDGLYRAVDIYLKAHPMLTENECKKLCKFIDCQKLSQEACNHVPD 144
            F+A++EILPDYARV DDGLYRAVDIYLKAHPMLTE+ECKKLCKFIDC+KLSQEACNH   
Sbjct: 436  FMAMLEILPDYARVIDDGLYRAVDIYLKAHPMLTEHECKKLCKFIDCKKLSQEACNHAAQ 495

Query: 143  GSTCG-------FYTWQVRLKRLFSSSCGDGVL 66
                         Y  Q+RLK   S S GDG L
Sbjct: 496  NDRLPVQMTVRVLYFEQLRLKSSLSGSSGDGFL 528


>ref|XP_002531804.1| Root phototropism protein, putative [Ricinus communis]
           gi|223528538|gb|EEF30561.1| Root phototropism protein,
           putative [Ricinus communis]
          Length = 592

 Score =  379 bits (973), Expect = e-103
 Identities = 188/266 (70%), Positives = 221/266 (83%)
 Frame = -3

Query: 863 RPDSIITSLMHYAQTSLKGIGKNEVWDQTKINPQCGMAQNEPKVILEILVSLLPAEKSTS 684
           RPDSI+ SLMHYAQTSLKGIGK ++W+  K+ P   M +N+  +ILEILVSL+P+EKS+S
Sbjct: 226 RPDSIVASLMHYAQTSLKGIGKFQIWNPAKMKPSPSMGENDQSLILEILVSLMPSEKSSS 285

Query: 683 IPLNFLFGMLRLAITVDATVACRLELERRIGFRLEMVSLDDLLIPSLRAGDPLFNVDTVH 504
           IPL+FLFGMLR+ I +DAT+ACRLELERRI FRLEMVSLDDLLIPS+R+GD LF+VDTVH
Sbjct: 286 IPLSFLFGMLRMGIMLDATIACRLELERRIAFRLEMVSLDDLLIPSIRSGDSLFDVDTVH 345

Query: 503 RILVNFLQQLEDEESEEASHFGYELEGLGSPSHGSVLKVGQLIDCYLAEIAPDPYLDLQK 324
           RILVNFLQ++E+EE+E+    GYE EGLGSP HGS+LKVG+LID YLAEIAPDPYL L K
Sbjct: 346 RILVNFLQRVEEEENEDC---GYESEGLGSPGHGSLLKVGRLIDAYLAEIAPDPYLSLLK 402

Query: 323 FIAIIEILPDYARVTDDGLYRAVDIYLKAHPMLTENECKKLCKFIDCQKLSQEACNHVPD 144
           FIA+IEILPDYARV DDGLYRA+DIYLKAHPML+E++CKKLCKFIDCQKLSQ+ACNH   
Sbjct: 403 FIAMIEILPDYARVIDDGLYRAIDIYLKAHPMLSEHDCKKLCKFIDCQKLSQDACNHAAQ 462

Query: 143 GSTCGFYTWQVRLKRLFSSSCGDGVL 66
                     V++    S S GDG L
Sbjct: 463 NDRL-----PVQMTNALSGSSGDGFL 483


>emb|CBI31167.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  372 bits (954), Expect = e-101
 Identities = 183/237 (77%), Positives = 210/237 (88%)
 Frame = -3

Query: 863 RPDSIITSLMHYAQTSLKGIGKNEVWDQTKINPQCGMAQNEPKVILEILVSLLPAEKSTS 684
           +PDSI+ SLMHYAQ SLKGIGK ++W  T++ P  GM +N   +I+E LVSLLPAEKS+S
Sbjct: 225 QPDSIVASLMHYAQASLKGIGKQQIWHPTRMKPSPGMVENSQCIIVETLVSLLPAEKSSS 284

Query: 683 IPLNFLFGMLRLAITVDATVACRLELERRIGFRLEMVSLDDLLIPSLRAGDPLFNVDTVH 504
           IPL+FLFGMLR+AI V A VACRLELERRIGFRLEMVSLDDLLIP ++ GD LF+VDTVH
Sbjct: 285 IPLSFLFGMLRMAILVGANVACRLELERRIGFRLEMVSLDDLLIPCVQTGDSLFDVDTVH 344

Query: 503 RILVNFLQQLEDEESEEASHFGYELEGLGSPSHGSVLKVGQLIDCYLAEIAPDPYLDLQK 324
           RILVNFLQ++E+EE+EE   +GYE E LGSPS GSVLKVG+LID YLAEIAPDPYL+LQK
Sbjct: 345 RILVNFLQRIEEEENEE---YGYESEALGSPSQGSVLKVGRLIDSYLAEIAPDPYLNLQK 401

Query: 323 FIAIIEILPDYARVTDDGLYRAVDIYLKAHPMLTENECKKLCKFIDCQKLSQEACNH 153
           F+A++EILPDYARV DDGLYRAVDIYLKAHPMLTE+ECKKLCKFIDC+KLSQEACNH
Sbjct: 402 FMAMLEILPDYARVIDDGLYRAVDIYLKAHPMLTEHECKKLCKFIDCKKLSQEACNH 458


>ref|XP_002323684.1| predicted protein [Populus trichocarpa] gi|222868314|gb|EEF05445.1|
            predicted protein [Populus trichocarpa]
          Length = 550

 Score =  370 bits (949), Expect = e-100
 Identities = 184/273 (67%), Positives = 219/273 (80%), Gaps = 7/273 (2%)
 Frame = -3

Query: 863  RPDSIITSLMHYAQTSLKGIGKNEVWDQTKINPQCGMAQNEPKVILEILVSLLPAEKSTS 684
            R DSI+ SLMHYAQ SLKGIGK+++W+  ++     M +N+  +I+E LVSL+P +KS+S
Sbjct: 203  RLDSIVASLMHYAQISLKGIGKSQIWNPARMKSSPNMEENDQSIIVETLVSLMPTDKSSS 262

Query: 683  IPLNFLFGMLRLAITVDATVACRLELERRIGFRLEMVSLDDLLIPSLRAGDPLFNVDTVH 504
            IPLNFLFGMLR+AI +DA +ACRLELERRI FRLEMVSLDDLLIPS+R+GD LF+VDTVH
Sbjct: 263  IPLNFLFGMLRMAIMLDAAIACRLELERRIAFRLEMVSLDDLLIPSVRSGDSLFDVDTVH 322

Query: 503  RILVNFLQQLEDEESEEASHFGYELEGLGSPSHGSVLKVGQLIDCYLAEIAPDPYLDLQK 324
            RILVNFLQ++E+EE+E+    GYE EG+GSP HGS+LKVG+LID YLAE APDPYL LQK
Sbjct: 323  RILVNFLQRVEEEENEDC---GYESEGIGSPGHGSLLKVGRLIDSYLAETAPDPYLSLQK 379

Query: 323  FIAIIEILPDYARVTDDGLYRAVDIYLKAHPMLTENECKKLCKFIDCQKLSQEACNHVPD 144
            F A+IEILPDYARV DDGLYRA+DIYLKAHP+L+E+ECKKLCK IDCQKLSQEACNH   
Sbjct: 380  FTAMIEILPDYARVIDDGLYRAIDIYLKAHPLLSEHECKKLCKLIDCQKLSQEACNHAAQ 439

Query: 143  GSTCG-------FYTWQVRLKRLFSSSCGDGVL 66
                         Y+ Q+RLK   S S GDG L
Sbjct: 440  NDRLPVQMTVQVLYSEQLRLKNALSGSSGDGFL 472


>ref|XP_003552325.1| PREDICTED: BTB/POZ domain-containing protein At3g08570-like [Glycine
            max]
          Length = 596

 Score =  348 bits (892), Expect = 1e-93
 Identities = 175/266 (65%), Positives = 210/266 (78%)
 Frame = -3

Query: 863  RPDSIITSLMHYAQTSLKGIGKNEVWDQTKINPQCGMAQNEPKVILEILVSLLPAEKSTS 684
            R DSII SLMHYAQ+SLKGIGK + W+ ++ N      + + ++I+E LVSL+P +KS+S
Sbjct: 230  RSDSIIASLMHYAQSSLKGIGKCQFWNPSRTNSSPTSVEKDQRIIVETLVSLMPTDKSSS 289

Query: 683  IPLNFLFGMLRLAITVDATVACRLELERRIGFRLEMVSLDDLLIPSLRAGDPLFNVDTVH 504
            IPL FLFGML++AI + AT+ CRLELERRI  RLEMVSLDDLLIPSL++GD LF+VDTVH
Sbjct: 290  IPLTFLFGMLKMAIMLGATIPCRLELERRIALRLEMVSLDDLLIPSLQSGDSLFDVDTVH 349

Query: 503  RILVNFLQQLEDEESEEASHFGYELEGLGSPSHGSVLKVGQLIDCYLAEIAPDPYLDLQK 324
            R+LVNFLQ++E+EE+E+   +GYE +G  S  HGS+LKVGQLID YLAEIAPDPYL LQK
Sbjct: 350  RLLVNFLQRVEEEETED---YGYESDGFCSSGHGSLLKVGQLIDAYLAEIAPDPYLSLQK 406

Query: 323  FIAIIEILPDYARVTDDGLYRAVDIYLKAHPMLTENECKKLCKFIDCQKLSQEACNHVPD 144
            FIA+IEILPDYARV DDGLYRAVDIYLKAHP LTE ECKKLCK IDCQKLS+EACNH   
Sbjct: 407  FIALIEILPDYARVIDDGLYRAVDIYLKAHPALTEQECKKLCKLIDCQKLSEEACNHAAQ 466

Query: 143  GSTCGFYTWQVRLKRLFSSSCGDGVL 66
                      +++    S S GDG+L
Sbjct: 467  NDRL-----PLQMVNALSGSSGDGLL 487


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