BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029254
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525140.1| ring finger protein, putative [Ricinus commu...   143   2e-32
ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   137   1e-30
emb|CBI21948.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002325584.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_003541894.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   113   2e-23

>ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
           gi|223535599|gb|EEF37267.1| ring finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  143 bits (360), Expect = 2e-32
 Identities = 84/171 (49%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
 Frame = -1

Query: 538 TNEQPRRGLDAAVIATLPLFVYKGA*-EIKDRHIECAVCLSNLEDEEMARLLPNCKHTFH 362
           T+E P+ GLD  VIA+LP+FVYK +  + +D   ECAVCLS L+D+EMAR LPNCKHTFH
Sbjct: 92  TSEPPKTGLDPVVIASLPIFVYKQSNGDQEDNDQECAVCLSVLQDQEMARSLPNCKHTFH 151

Query: 361 SQCIDTWLRVHSTCPICRTEAEPRAQPESIELAVVVPGLPAMATAPPVDAINPTLPCFEG 182
           ++CID WL  HSTCPICRTEAEPR QPE  E  V   G    ATAPP++ +       EG
Sbjct: 152 AECIDKWLTSHSTCPICRTEAEPRIQPEPREGPVPAGG---AATAPPLEQVGT-----EG 203

Query: 181 TSD-XXXXXXXXXXXXXXXXXXXXXXXXREKSDRRLQPNEQTDCARDLERQ 32
           TS+                         RE+S RR+Q   Q     DLERQ
Sbjct: 204 TSESGNQSSSNKASGSISRLSSFRRILSRERSSRRIQSETQEQGLEDLERQ 254


>ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 247

 Score =  137 bits (345), Expect = 1e-30
 Identities = 70/126 (55%), Positives = 90/126 (71%), Gaps = 2/126 (1%)
 Frame = -1

Query: 544 VHTNEQPRRGLDAAVIATLPLFVY-KGA*EIKDRHIECAVCLSNLEDEEMARLLPNCKHT 368
           VH++E P+ GLD +VI +LP+F + +   + +    +CAVCLS LE+ E+ARLLPNCKHT
Sbjct: 76  VHSDEPPKTGLDQSVIDSLPMFKFSENDTQEEGGTTDCAVCLSVLEEGEIARLLPNCKHT 135

Query: 367 FHSQCIDTWLRVHSTCPICRTEAEPRAQPESIELAVVVPGLPAMATAPPVDAIN-PTLPC 191
           FH++CID WL  HSTCPICRTEAEPR QPE  E  V++  +P  A APP D  N  +L C
Sbjct: 136 FHAECIDKWLGTHSTCPICRTEAEPRLQPEPREAMVMIRTVPP-APAPPSDGTNSSSLAC 194

Query: 190 FEGTSD 173
            EGTS+
Sbjct: 195 SEGTSE 200


>emb|CBI21948.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/120 (55%), Positives = 85/120 (70%), Gaps = 2/120 (1%)
 Frame = -1

Query: 526 PRRGLDAAVIATLPLFVY-KGA*EIKDRHIECAVCLSNLEDEEMARLLPNCKHTFHSQCI 350
           P+ GLD +VI +LP+F + +   + +    +CAVCLS LE+ E+ARLLPNCKHTFH++CI
Sbjct: 10  PKTGLDQSVIDSLPMFKFSENDTQEEGGTTDCAVCLSVLEEGEIARLLPNCKHTFHAECI 69

Query: 349 DTWLRVHSTCPICRTEAEPRAQPESIELAVVVPGLPAMATAPPVDAIN-PTLPCFEGTSD 173
           D WL  HSTCPICRTEAEPR QPE  E  V++  +P  A APP D  N  +L C EGTS+
Sbjct: 70  DKWLGTHSTCPICRTEAEPRLQPEPREAMVMIRTVPP-APAPPSDGTNSSSLACSEGTSE 128


>ref|XP_002325584.1| predicted protein [Populus trichocarpa] gi|222862459|gb|EEE99965.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/79 (69%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
 Frame = -1

Query: 526 PRRGLDAAVIATLPLFVYKGA*-EIKDRHIECAVCLSNLEDEEMARLLPNCKHTFHSQCI 350
           P+RGLD  VIA+LP+FVY+    + +D  IECAVCLS LED+EMAR+LPNCKH FH++CI
Sbjct: 1   PKRGLDPTVIASLPIFVYQQTEGQAEDDLIECAVCLSMLEDQEMARILPNCKHKFHAECI 60

Query: 349 DTWLRVHSTCPICRTEAEP 293
           D WL  HSTCPICRTEAEP
Sbjct: 61  DKWLSSHSTCPICRTEAEP 79


>ref|XP_003541894.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Glycine max]
          Length = 229

 Score =  113 bits (282), Expect = 2e-23
 Identities = 70/176 (39%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
 Frame = -1

Query: 541 HTNEQPRRGLDAAVIATLPLFVYKGA*EIKDRHIECAVCLSNLEDEEMARLLPNCKHTFH 362
           H       GLD  +I TLP F +K   +  +  +EC VCLS LED E  RLLPNCKH+FH
Sbjct: 66  HAEPDNNTGLDPVLITTLPTFPFK---QPNNDSVECTVCLSVLEDGEQVRLLPNCKHSFH 122

Query: 361 SQCIDTWLRVHSTCPICRTEAEP-RAQPESIELAVVVPGLPAMATAPPVDAINPTLPCF- 188
             CIDTWL  HSTCPICRT+AEP R +P+  E             +  +D + PT P   
Sbjct: 123 VGCIDTWLASHSTCPICRTKAEPVRLEPQPRE---------GPTGSVLLDVVAPTAPLLF 173

Query: 187 ---EGTSDXXXXXXXXXXXXXXXXXXXXXXXXR-EKSDRRLQPNEQTDCARDLERQ 32
              EGT D                          ++S RR+QP+   D   DLERQ
Sbjct: 174 ENVEGTLDGANNNGSPKVSGSNSRLSSFRRILSRDRSMRRIQPSSHDDVEHDLERQ 229