BLASTX nr result
ID: Coptis23_contig00029247
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029247 (712 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274426.1| PREDICTED: WD repeat domain-containing prote... 303 2e-80 emb|CAN65101.1| hypothetical protein VITISV_039726 [Vitis vinifera] 303 2e-80 ref|XP_003630176.1| Mitogen-activated protein kinase organizer [... 299 4e-79 ref|XP_004141980.1| PREDICTED: WD repeat domain-containing prote... 296 2e-78 ref|XP_002298725.1| predicted protein [Populus trichocarpa] gi|2... 296 2e-78 >ref|XP_002274426.1| PREDICTED: WD repeat domain-containing protein 83 [Vitis vinifera] gi|297743030|emb|CBI35897.3| unnamed protein product [Vitis vinifera] Length = 299 Score = 303 bits (777), Expect = 2e-80 Identities = 141/162 (87%), Positives = 155/162 (95%) Frame = +3 Query: 3 EPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSNDG 182 EPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGRE+SDDLGQPVNCIS+SND Sbjct: 137 EPIQIIDTFSDSVMSVCLTKSEIIAGSVDGTVRTFDIRIGRELSDDLGQPVNCISMSNDA 196 Query: 183 NCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWD 362 NC+LASCLDST+RLLDR+TGELLQEYKGHTCKS+KMDCCLTN DAH+T GSEDGFI+FWD Sbjct: 197 NCILASCLDSTLRLLDRSTGELLQEYKGHTCKSYKMDCCLTNTDAHVTSGSEDGFIFFWD 256 Query: 363 LVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 488 LVDASVVSSFRAH+SVVTSVSYHPKD+CM+T+SVD TIRVWK Sbjct: 257 LVDASVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWK 298 >emb|CAN65101.1| hypothetical protein VITISV_039726 [Vitis vinifera] Length = 264 Score = 303 bits (777), Expect = 2e-80 Identities = 141/162 (87%), Positives = 155/162 (95%) Frame = +3 Query: 3 EPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSNDG 182 EPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGRE+SDDLGQPVNCIS+SND Sbjct: 102 EPIQIIDTFSDSVMSVCLTKSEIIAGSVDGTVRTFDIRIGRELSDDLGQPVNCISMSNDA 161 Query: 183 NCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWD 362 NC+LASCLDST+RLLDR+TGELLQEYKGHTCKS+KMDCCLTN DAH+T GSEDGFI+FWD Sbjct: 162 NCILASCLDSTLRLLDRSTGELLQEYKGHTCKSYKMDCCLTNTDAHVTSGSEDGFIFFWD 221 Query: 363 LVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 488 LVDASVVSSFRAH+SVVTSVSYHPKD+CM+T+SVD TIRVWK Sbjct: 222 LVDASVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWK 263 >ref|XP_003630176.1| Mitogen-activated protein kinase organizer [Medicago truncatula] gi|355524198|gb|AET04652.1| Mitogen-activated protein kinase organizer [Medicago truncatula] Length = 306 Score = 299 bits (765), Expect = 4e-79 Identities = 139/162 (85%), Positives = 152/162 (93%) Frame = +3 Query: 3 EPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSNDG 182 EPIQIIDTF DSVMS+CLTK EI+ G VDGTVRTFD+RIGREISD LGQPVNCIS+SNDG Sbjct: 144 EPIQIIDTFADSVMSVCLTKTEIIGGSVDGTVRTFDMRIGREISDSLGQPVNCISMSNDG 203 Query: 183 NCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWD 362 NC+LA CLDST+RLLDRTTGELLQEYKGHT KS+K+DCCLTN DAH+TGGSEDGF+YFWD Sbjct: 204 NCILAGCLDSTVRLLDRTTGELLQEYKGHTNKSYKLDCCLTNTDAHVTGGSEDGFVYFWD 263 Query: 363 LVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 488 LVDASVVS FRAH+SVVTSVSYHPK+NCM+TSSVD TIRVWK Sbjct: 264 LVDASVVSKFRAHTSVVTSVSYHPKENCMITSSVDGTIRVWK 305 Score = 58.5 bits (140), Expect = 1e-06 Identities = 29/105 (27%), Positives = 54/105 (51%) Frame = +3 Query: 171 SNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFI 350 ++DGN +L+ D T+RL + G ++ YK H + D +T D++ + D + Sbjct: 34 NSDGNYILSCGKDRTIRLWNPHRGIHIKTYKSHGREV--RDVHVTTDNSKLCSCGGDRQV 91 Query: 351 YFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVW 485 Y+WD+ V+ FR H V V ++ + +V++ D ++R W Sbjct: 92 YYWDVATGRVIRKFRGHDGEVNGVKFNEYSSVVVSAGYDQSLRAW 136 >ref|XP_004141980.1| PREDICTED: WD repeat domain-containing protein 83-like [Cucumis sativus] Length = 299 Score = 296 bits (759), Expect = 2e-78 Identities = 137/162 (84%), Positives = 152/162 (93%) Frame = +3 Query: 3 EPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSNDG 182 EPIQIIDTF DSVMS+CLTK EI+ G VDGTVRTFD+RIGREISD+LGQ VNCIS+SND Sbjct: 137 EPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQTVNCISMSNDA 196 Query: 183 NCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWD 362 NC+LASCLDST+RLLDR++GELLQEYKGHTCKS+K+DCCLTN DAH+TGGSEDGF+YFWD Sbjct: 197 NCILASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFVYFWD 256 Query: 363 LVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 488 LVDASVVS FRAHSSVVTSVSYHPKD CM+T+SVD TIRVWK Sbjct: 257 LVDASVVSKFRAHSSVVTSVSYHPKDKCMITASVDGTIRVWK 298 >ref|XP_002298725.1| predicted protein [Populus trichocarpa] gi|222845983|gb|EEE83530.1| predicted protein [Populus trichocarpa] Length = 300 Score = 296 bits (759), Expect = 2e-78 Identities = 138/162 (85%), Positives = 152/162 (93%) Frame = +3 Query: 3 EPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSNDG 182 EPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGREISD+LG PVNCIS+SNDG Sbjct: 138 EPIQIIDTFSDSVMSVCLTKTEIIAGSVDGTVRTFDIRIGREISDNLGHPVNCISMSNDG 197 Query: 183 NCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWD 362 NC+LASCLDST+RLLDRTTGELLQEYKGH CKS+K+DCCLTN DAH+ GGSEDG+IYFWD Sbjct: 198 NCILASCLDSTLRLLDRTTGELLQEYKGHICKSYKLDCCLTNTDAHVAGGSEDGYIYFWD 257 Query: 363 LVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 488 LVDASV+S FRAHSSVVTSVSYHP DNCMV++SVD TI+VWK Sbjct: 258 LVDASVLSRFRAHSSVVTSVSYHPTDNCMVSASVDGTIKVWK 299 Score = 56.6 bits (135), Expect = 5e-06 Identities = 29/105 (27%), Positives = 54/105 (51%) Frame = +3 Query: 171 SNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFI 350 + DGN L+ D T+RL + G ++ YK H + D +T D++ + D + Sbjct: 28 NGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREV--RDVHVTQDNSKLVSCGGDRQV 85 Query: 351 YFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVW 485 ++WD+ V+ FR H S V +V ++ + +V++ D ++R W Sbjct: 86 FYWDVATGRVIRKFRGHGSEVNAVKFNEYASVVVSAGYDQSLRAW 130