BLASTX nr result

ID: Coptis23_contig00029247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029247
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274426.1| PREDICTED: WD repeat domain-containing prote...   303   2e-80
emb|CAN65101.1| hypothetical protein VITISV_039726 [Vitis vinifera]   303   2e-80
ref|XP_003630176.1| Mitogen-activated protein kinase organizer [...   299   4e-79
ref|XP_004141980.1| PREDICTED: WD repeat domain-containing prote...   296   2e-78
ref|XP_002298725.1| predicted protein [Populus trichocarpa] gi|2...   296   2e-78

>ref|XP_002274426.1| PREDICTED: WD repeat domain-containing protein 83 [Vitis vinifera]
           gi|297743030|emb|CBI35897.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score =  303 bits (777), Expect = 2e-80
 Identities = 141/162 (87%), Positives = 155/162 (95%)
 Frame = +3

Query: 3   EPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSNDG 182
           EPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGRE+SDDLGQPVNCIS+SND 
Sbjct: 137 EPIQIIDTFSDSVMSVCLTKSEIIAGSVDGTVRTFDIRIGRELSDDLGQPVNCISMSNDA 196

Query: 183 NCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWD 362
           NC+LASCLDST+RLLDR+TGELLQEYKGHTCKS+KMDCCLTN DAH+T GSEDGFI+FWD
Sbjct: 197 NCILASCLDSTLRLLDRSTGELLQEYKGHTCKSYKMDCCLTNTDAHVTSGSEDGFIFFWD 256

Query: 363 LVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 488
           LVDASVVSSFRAH+SVVTSVSYHPKD+CM+T+SVD TIRVWK
Sbjct: 257 LVDASVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWK 298


>emb|CAN65101.1| hypothetical protein VITISV_039726 [Vitis vinifera]
          Length = 264

 Score =  303 bits (777), Expect = 2e-80
 Identities = 141/162 (87%), Positives = 155/162 (95%)
 Frame = +3

Query: 3   EPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSNDG 182
           EPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGRE+SDDLGQPVNCIS+SND 
Sbjct: 102 EPIQIIDTFSDSVMSVCLTKSEIIAGSVDGTVRTFDIRIGRELSDDLGQPVNCISMSNDA 161

Query: 183 NCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWD 362
           NC+LASCLDST+RLLDR+TGELLQEYKGHTCKS+KMDCCLTN DAH+T GSEDGFI+FWD
Sbjct: 162 NCILASCLDSTLRLLDRSTGELLQEYKGHTCKSYKMDCCLTNTDAHVTSGSEDGFIFFWD 221

Query: 363 LVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 488
           LVDASVVSSFRAH+SVVTSVSYHPKD+CM+T+SVD TIRVWK
Sbjct: 222 LVDASVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWK 263


>ref|XP_003630176.1| Mitogen-activated protein kinase organizer [Medicago truncatula]
           gi|355524198|gb|AET04652.1| Mitogen-activated protein
           kinase organizer [Medicago truncatula]
          Length = 306

 Score =  299 bits (765), Expect = 4e-79
 Identities = 139/162 (85%), Positives = 152/162 (93%)
 Frame = +3

Query: 3   EPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSNDG 182
           EPIQIIDTF DSVMS+CLTK EI+ G VDGTVRTFD+RIGREISD LGQPVNCIS+SNDG
Sbjct: 144 EPIQIIDTFADSVMSVCLTKTEIIGGSVDGTVRTFDMRIGREISDSLGQPVNCISMSNDG 203

Query: 183 NCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWD 362
           NC+LA CLDST+RLLDRTTGELLQEYKGHT KS+K+DCCLTN DAH+TGGSEDGF+YFWD
Sbjct: 204 NCILAGCLDSTVRLLDRTTGELLQEYKGHTNKSYKLDCCLTNTDAHVTGGSEDGFVYFWD 263

Query: 363 LVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 488
           LVDASVVS FRAH+SVVTSVSYHPK+NCM+TSSVD TIRVWK
Sbjct: 264 LVDASVVSKFRAHTSVVTSVSYHPKENCMITSSVDGTIRVWK 305



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 29/105 (27%), Positives = 54/105 (51%)
 Frame = +3

Query: 171 SNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFI 350
           ++DGN +L+   D T+RL +   G  ++ YK H  +    D  +T D++ +     D  +
Sbjct: 34  NSDGNYILSCGKDRTIRLWNPHRGIHIKTYKSHGREV--RDVHVTTDNSKLCSCGGDRQV 91

Query: 351 YFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVW 485
           Y+WD+    V+  FR H   V  V ++   + +V++  D ++R W
Sbjct: 92  YYWDVATGRVIRKFRGHDGEVNGVKFNEYSSVVVSAGYDQSLRAW 136


>ref|XP_004141980.1| PREDICTED: WD repeat domain-containing protein 83-like [Cucumis
           sativus]
          Length = 299

 Score =  296 bits (759), Expect = 2e-78
 Identities = 137/162 (84%), Positives = 152/162 (93%)
 Frame = +3

Query: 3   EPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSNDG 182
           EPIQIIDTF DSVMS+CLTK EI+ G VDGTVRTFD+RIGREISD+LGQ VNCIS+SND 
Sbjct: 137 EPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQTVNCISMSNDA 196

Query: 183 NCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWD 362
           NC+LASCLDST+RLLDR++GELLQEYKGHTCKS+K+DCCLTN DAH+TGGSEDGF+YFWD
Sbjct: 197 NCILASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFVYFWD 256

Query: 363 LVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 488
           LVDASVVS FRAHSSVVTSVSYHPKD CM+T+SVD TIRVWK
Sbjct: 257 LVDASVVSKFRAHSSVVTSVSYHPKDKCMITASVDGTIRVWK 298


>ref|XP_002298725.1| predicted protein [Populus trichocarpa] gi|222845983|gb|EEE83530.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  296 bits (759), Expect = 2e-78
 Identities = 138/162 (85%), Positives = 152/162 (93%)
 Frame = +3

Query: 3   EPIQIIDTFLDSVMSICLTKHEILAGCVDGTVRTFDIRIGREISDDLGQPVNCISLSNDG 182
           EPIQIIDTF DSVMS+CLTK EI+AG VDGTVRTFDIRIGREISD+LG PVNCIS+SNDG
Sbjct: 138 EPIQIIDTFSDSVMSVCLTKTEIIAGSVDGTVRTFDIRIGREISDNLGHPVNCISMSNDG 197

Query: 183 NCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFIYFWD 362
           NC+LASCLDST+RLLDRTTGELLQEYKGH CKS+K+DCCLTN DAH+ GGSEDG+IYFWD
Sbjct: 198 NCILASCLDSTLRLLDRTTGELLQEYKGHICKSYKLDCCLTNTDAHVAGGSEDGYIYFWD 257

Query: 363 LVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVWK 488
           LVDASV+S FRAHSSVVTSVSYHP DNCMV++SVD TI+VWK
Sbjct: 258 LVDASVLSRFRAHSSVVTSVSYHPTDNCMVSASVDGTIKVWK 299



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 29/105 (27%), Positives = 54/105 (51%)
 Frame = +3

Query: 171 SNDGNCVLASCLDSTMRLLDRTTGELLQEYKGHTCKSFKMDCCLTNDDAHITGGSEDGFI 350
           + DGN  L+   D T+RL +   G  ++ YK H  +    D  +T D++ +     D  +
Sbjct: 28  NGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREV--RDVHVTQDNSKLVSCGGDRQV 85

Query: 351 YFWDLVDASVVSSFRAHSSVVTSVSYHPKDNCMVTSSVDSTIRVW 485
           ++WD+    V+  FR H S V +V ++   + +V++  D ++R W
Sbjct: 86  FYWDVATGRVIRKFRGHGSEVNAVKFNEYASVVVSAGYDQSLRAW 130


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