BLASTX nr result

ID: Coptis23_contig00029241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029241
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_002279155.1| PREDICTED: ABC transporter G family member 3...   131   5e-29
ref|XP_002525637.1| ATP-binding cassette transporter, putative [...   131   5e-29
ref|XP_003544291.1| PREDICTED: ABC transporter G family member 3...   128   6e-28
ref|XP_003615634.1| Pleiotropic drug resistance ABC transporter ...   127   1e-27

>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
           predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/75 (85%), Positives = 73/75 (97%)
 Frame = -3

Query: 226 VRLEKEKNIRPNPEIDAFMKASSVGGTTHSLATDYILKVLGLDVCAETIVGNDMLRGVSG 47
           VRLEKE+N+RPNPE+DAFMKASSVGG  HS++TDY+LKVLGLDVC+ET+VGNDMLRGVSG
Sbjct: 274 VRLEKERNVRPNPEVDAFMKASSVGGKKHSISTDYVLKVLGLDVCSETVVGNDMLRGVSG 333

Query: 46  GQRKRVTTGEVIVGP 2
           GQRKRVTTGE+IVGP
Sbjct: 334 GQRKRVTTGEMIVGP 348


>ref|XP_002279155.1| PREDICTED: ABC transporter G family member 31-like [Vitis vinifera]
          Length = 1415

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/74 (82%), Positives = 72/74 (97%)
 Frame = -3

Query: 223 RLEKEKNIRPNPEIDAFMKASSVGGTTHSLATDYILKVLGLDVCAETIVGNDMLRGVSGG 44
           RLEKE++IRP+PEIDAFMKAS+ GG THS++TDY+LKVLGLDVC+ETIVGNDMLRGVSGG
Sbjct: 269 RLEKERDIRPSPEIDAFMKASAFGGRTHSISTDYVLKVLGLDVCSETIVGNDMLRGVSGG 328

Query: 43  QRKRVTTGEVIVGP 2
           Q++RVTTGE+IVGP
Sbjct: 329 QKRRVTTGEMIVGP 342


>ref|XP_002525637.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223535073|gb|EEF36755.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1433

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/75 (82%), Positives = 72/75 (96%)
 Frame = -3

Query: 226 VRLEKEKNIRPNPEIDAFMKASSVGGTTHSLATDYILKVLGLDVCAETIVGNDMLRGVSG 47
           +RLEKE++IRP+PEIDAFMKASSV G  HS++TDY+LKVLGLDVCAET+VG+DMLRGVSG
Sbjct: 273 IRLEKEQDIRPSPEIDAFMKASSVAGKKHSVSTDYVLKVLGLDVCAETVVGSDMLRGVSG 332

Query: 46  GQRKRVTTGEVIVGP 2
           GQRKRVTTGE+IVGP
Sbjct: 333 GQRKRVTTGEMIVGP 347


>ref|XP_003544291.1| PREDICTED: ABC transporter G family member 31-like [Glycine max]
          Length = 1440

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/74 (82%), Positives = 69/74 (93%)
 Frame = -3

Query: 223 RLEKEKNIRPNPEIDAFMKASSVGGTTHSLATDYILKVLGLDVCAETIVGNDMLRGVSGG 44
           R E E+NIRP+PE+DAFMKASSVGG  HS+ TDYILKVLGLD+C++TIVGNDMLRGVSGG
Sbjct: 274 RREIERNIRPSPEVDAFMKASSVGGKKHSVNTDYILKVLGLDICSDTIVGNDMLRGVSGG 333

Query: 43  QRKRVTTGEVIVGP 2
           QRKRVTTGE+IVGP
Sbjct: 334 QRKRVTTGEMIVGP 347


>ref|XP_003615634.1| Pleiotropic drug resistance ABC transporter family protein
           [Medicago truncatula] gi|355516969|gb|AES98592.1|
           Pleiotropic drug resistance ABC transporter family
           protein [Medicago truncatula]
          Length = 1487

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/73 (83%), Positives = 68/73 (93%)
 Frame = -3

Query: 220 LEKEKNIRPNPEIDAFMKASSVGGTTHSLATDYILKVLGLDVCAETIVGNDMLRGVSGGQ 41
           LE E+NIRP+PEIDAFMKASSVGG  HS+ TDYILKVLGLDVC++TIVGN+M RGVSGGQ
Sbjct: 272 LENERNIRPSPEIDAFMKASSVGGKKHSVNTDYILKVLGLDVCSDTIVGNEMTRGVSGGQ 331

Query: 40  RKRVTTGEVIVGP 2
           RKRVTTGE+IVGP
Sbjct: 332 RKRVTTGEMIVGP 344


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