BLASTX nr result

ID: Coptis23_contig00029238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029238
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624129.1| ABC transporter [Medicago truncatula] gi|355...   435   e-120
ref|NP_564850.1| protein triGALACTOSYLDIACYLGLYCEROL 3 [Arabidop...   435   e-120
ref|NP_001242603.1| uncharacterized protein LOC100783283 [Glycin...   434   e-119
ref|XP_002886917.1| ATNAP11 [Arabidopsis lyrata subsp. lyrata] g...   433   e-119
ref|XP_003534523.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...   431   e-118

>ref|XP_003624129.1| ABC transporter [Medicago truncatula] gi|355499144|gb|AES80347.1|
           ABC transporter [Medicago truncatula]
          Length = 346

 Score =  435 bits (1119), Expect = e-120
 Identities = 221/280 (78%), Positives = 250/280 (89%)
 Frame = -2

Query: 985 QLNNQRSFRGCVSSNDVLIECKDIYKSFEEKEILRGVSFKIHDGEAVGIIGPSGTGKSTV 806
           QLN  R        +DVLIEC+D+YKSF EK+IL GVSFKI  GEAVGIIGPSGTGKST+
Sbjct: 71  QLNKARDHE---DDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTI 127

Query: 805 LKIMAGLLTPDKGDVFIRGKKRHGLVSDEEIFGLRIGLVFQSASLFDSLSVRENVGFRLY 626
           LKI+AGLL PDKG+V+IRG+KR GL+SD+EI GLRIGLVFQSA+LFDSL+VRENVGF LY
Sbjct: 128 LKIIAGLLAPDKGEVYIRGRKRDGLISDDEISGLRIGLVFQSAALFDSLTVRENVGFLLY 187

Query: 625 EKSNMSDSDIEESVRENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPE 446
           E S+M + +I E V+E LAAVGLKGVE+RLPSELSGGMKKRVALARSIIFD TK++IEPE
Sbjct: 188 EHSSMPEEEISELVKETLAAVGLKGVENRLPSELSGGMKKRVALARSIIFDTTKDSIEPE 247

Query: 445 VLLYDEPTAGLDPIASTVVEDLIRSVHLKGEDGVGEVGHNIASYVVVTHQHSTIKRAVDR 266
           VLLYDEPTAGLDPIASTVVEDLIRSVH+KG D +G+ G NI+SYVVVTHQHSTIKRA+DR
Sbjct: 248 VLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPG-NISSYVVVTHQHSTIKRAIDR 306

Query: 265 LLFLHEGKVVWEGRTHEFTTSTNPIVRQFASGSLDGPIRY 146
           LLFLH+GK+VWEG THEFTTSTNPIV+QFASGSLDGPI+Y
Sbjct: 307 LLFLHKGKLVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY 346


>ref|NP_564850.1| protein triGALACTOSYLDIACYLGLYCEROL 3 [Arabidopsis thaliana]
           gi|75333028|sp|Q9AT00.1|AB13I_ARATH RecName:
           Full=Protein TRIGALACTOSYLDIACYLGLYCEROL 3,
           chloroplastic; AltName: Full=ABC transporter I family
           member 13; Short=ABC transporter ABCI.13;
           Short=AtABCI13; AltName: Full=Non-intrinsic ABC protein
           11; Flags: Precursor
           gi|13605495|gb|AAK32741.1|AF361573_1 At1g65410/T8F5_19
           [Arabidopsis thaliana] gi|20334770|gb|AAM16246.1|
           At1g65410/T8F5_19 [Arabidopsis thaliana]
           gi|332196249|gb|AEE34370.1| protein
           triGALACTOSYLDIACYLGLYCEROL 3 [Arabidopsis thaliana]
          Length = 345

 Score =  435 bits (1119), Expect = e-120
 Identities = 220/272 (80%), Positives = 246/272 (90%)
 Frame = -2

Query: 961 RGCVSSNDVLIECKDIYKSFEEKEILRGVSFKIHDGEAVGIIGPSGTGKSTVLKIMAGLL 782
           RG  + +DVLIEC+D+YKSF EK IL+GVSFKI  GEAVG+IGPSGTGKST+LKIMAGLL
Sbjct: 75  RGLENDSDVLIECRDVYKSFGEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLL 134

Query: 781 TPDKGDVFIRGKKRHGLVSDEEIFGLRIGLVFQSASLFDSLSVRENVGFRLYEKSNMSDS 602
            PDKG+V+IRGKKR GL+SDEEI GLRIGLVFQSA+LFDSLSVRENVGF LYE+S MS++
Sbjct: 135 APDKGEVYIRGKKRAGLISDEEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSEN 194

Query: 601 DIEESVRENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLLYDEPT 422
            I E V + LAAVGLKGVE+RLPSELSGGMKKRVALARS+IFD TKE IEPEVLLYDEPT
Sbjct: 195 QISELVTQTLAAVGLKGVENRLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPT 254

Query: 421 AGLDPIASTVVEDLIRSVHLKGEDGVGEVGHNIASYVVVTHQHSTIKRAVDRLLFLHEGK 242
           AGLDPIASTVVEDLIRSVH+  ED VG+ G  IASY+VVTHQHSTI+RAVDRLLFL+EGK
Sbjct: 255 AGLDPIASTVVEDLIRSVHMTDEDAVGKPG-KIASYLVVTHQHSTIQRAVDRLLFLYEGK 313

Query: 241 VVWEGRTHEFTTSTNPIVRQFASGSLDGPIRY 146
           +VW+G THEFTTSTNPIV+QFA+GSLDGPIRY
Sbjct: 314 IVWQGMTHEFTTSTNPIVQQFATGSLDGPIRY 345


>ref|NP_001242603.1| uncharacterized protein LOC100783283 [Glycine max]
           gi|255638918|gb|ACU19761.1| unknown [Glycine max]
          Length = 345

 Score =  434 bits (1117), Expect = e-119
 Identities = 222/266 (83%), Positives = 244/266 (91%)
 Frame = -2

Query: 943 NDVLIECKDIYKSFEEKEILRGVSFKIHDGEAVGIIGPSGTGKSTVLKIMAGLLTPDKGD 764
           +DVLIEC+D+YKSF EK+IL GVSFKI  GEAVGIIGPSGTGKSTVLKI+AGLL PDKG+
Sbjct: 81  SDVLIECRDVYKSFGEKKILNGVSFKIKHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGE 140

Query: 763 VFIRGKKRHGLVSDEEIFGLRIGLVFQSASLFDSLSVRENVGFRLYEKSNMSDSDIEESV 584
           V+IRGKKR GLVSD++I GLRIGLVFQSA+LFDSL+VRENVGF LYE S+MS+  I E V
Sbjct: 141 VYIRGKKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISELV 200

Query: 583 RENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLLYDEPTAGLDPI 404
            E LAAVGLKGVEDRLPSELSGGMKKRVALARSII D TKE+IEPEVLLYDEPTAGLDPI
Sbjct: 201 METLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTKESIEPEVLLYDEPTAGLDPI 260

Query: 403 ASTVVEDLIRSVHLKGEDGVGEVGHNIASYVVVTHQHSTIKRAVDRLLFLHEGKVVWEGR 224
           ASTVVEDLIRSVH+KG+D  G+ G NI+SYVVVTHQHSTIKRA+DRLLFLH+GK+VWEG 
Sbjct: 261 ASTVVEDLIRSVHIKGQDARGKPG-NISSYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGM 319

Query: 223 THEFTTSTNPIVRQFASGSLDGPIRY 146
           THEFTTSTNPIV+QFASGSLDGPIRY
Sbjct: 320 THEFTTSTNPIVQQFASGSLDGPIRY 345


>ref|XP_002886917.1| ATNAP11 [Arabidopsis lyrata subsp. lyrata]
           gi|297332758|gb|EFH63176.1| ATNAP11 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 338

 Score =  433 bits (1113), Expect = e-119
 Identities = 220/275 (80%), Positives = 246/275 (89%)
 Frame = -2

Query: 970 RSFRGCVSSNDVLIECKDIYKSFEEKEILRGVSFKIHDGEAVGIIGPSGTGKSTVLKIMA 791
           R  R   + +DVLIEC+D+YKSF EK IL+GVSFKI  GEAVG+IGPSGTGKST+LKIMA
Sbjct: 65  RKQRELENDSDVLIECRDVYKSFGEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMA 124

Query: 790 GLLTPDKGDVFIRGKKRHGLVSDEEIFGLRIGLVFQSASLFDSLSVRENVGFRLYEKSNM 611
           GLL PDKG+V+IRGKKR GL+SDEEI GLRIGLVFQSA+LFDSLSVRENVGF LYE+S M
Sbjct: 125 GLLAPDKGEVYIRGKKRAGLISDEEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKM 184

Query: 610 SDSDIEESVRENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLLYD 431
           S++ I E V + LAAVGLKGVE+RLPSELSGGMKKRVALARS+IFD TKE IEPEVLLYD
Sbjct: 185 SENQISELVTQTLAAVGLKGVENRLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYD 244

Query: 430 EPTAGLDPIASTVVEDLIRSVHLKGEDGVGEVGHNIASYVVVTHQHSTIKRAVDRLLFLH 251
           EPTAGLDPIASTVVEDLIRSVH+  ED VG+ G  IASY+VVTHQHSTI+RAVDRLLFL+
Sbjct: 245 EPTAGLDPIASTVVEDLIRSVHMTDEDAVGKPG-KIASYLVVTHQHSTIQRAVDRLLFLY 303

Query: 250 EGKVVWEGRTHEFTTSTNPIVRQFASGSLDGPIRY 146
           EGK+VW+G THEFTTSTNPIV+QFA+GSLDGPIRY
Sbjct: 304 EGKIVWQGMTHEFTTSTNPIVQQFATGSLDGPIRY 338


>ref|XP_003534523.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3,
           chloroplastic-like [Glycine max]
          Length = 345

 Score =  431 bits (1108), Expect = e-118
 Identities = 221/266 (83%), Positives = 242/266 (90%)
 Frame = -2

Query: 943 NDVLIECKDIYKSFEEKEILRGVSFKIHDGEAVGIIGPSGTGKSTVLKIMAGLLTPDKGD 764
           +DVLIEC+D+YKSF EK+IL GVSFKI  GEAVGIIGPSGTGKSTVLKI+AGLL PDKG+
Sbjct: 81  SDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGE 140

Query: 763 VFIRGKKRHGLVSDEEIFGLRIGLVFQSASLFDSLSVRENVGFRLYEKSNMSDSDIEESV 584
           V+IRGKKR GLVSD++I GLRIGLVFQSA+LFDSL+VRENVGF LYE S+MS+  I E V
Sbjct: 141 VYIRGKKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISELV 200

Query: 583 RENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLLYDEPTAGLDPI 404
            E LAAVGLKGVEDRLPSELSGGMKKRVALARSII D T+E+ EPEVLLYDEPTAGLDPI
Sbjct: 201 TETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTEESKEPEVLLYDEPTAGLDPI 260

Query: 403 ASTVVEDLIRSVHLKGEDGVGEVGHNIASYVVVTHQHSTIKRAVDRLLFLHEGKVVWEGR 224
           ASTVVEDLIRSVH+KG D  G+ G NIASYVVVTHQHSTIKRA+DRLLFLH+GK+VWEG 
Sbjct: 261 ASTVVEDLIRSVHIKGRDARGKPG-NIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGM 319

Query: 223 THEFTTSTNPIVRQFASGSLDGPIRY 146
           THEFTTSTNPIV+QFASGSLDGPIRY
Sbjct: 320 THEFTTSTNPIVQQFASGSLDGPIRY 345


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