BLASTX nr result

ID: Coptis23_contig00029225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029225
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298051.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002298051.1| predicted protein [Populus trichocarpa] gi|222845309|gb|EEE82856.1|
           predicted protein [Populus trichocarpa]
          Length = 86

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
 Frame = +3

Query: 69  RPFTIVILILIFYQLSVPICSSRTLK-----QDDQTLHTEFSAPFSWRRYSAKSSSQGSN 233
           R F  +++IL   QLS    S R L      Q +QT+ T+ S  FSW  ++AK+  +GSN
Sbjct: 8   RSFLFLMIILAISQLS----SCRYLHINIRDQTNQTVETDVSTQFSWH-FTAKAP-EGSN 61

Query: 234 NGE-HDPIYGASDRLVPQGPNPLHN 305
             E  DP+YGAS R VP GPNPLHN
Sbjct: 62  KDEIDDPVYGASYRTVPGGPNPLHN 86


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