BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029222
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   100   1e-19
ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    98   8e-19
ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...    97   1e-18
ref|XP_003545609.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    97   1e-18
emb|CAK22423.1| regulator of chromosome condensation family prot...    95   7e-18

>ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 571

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/104 (50%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
 Frame = -1

Query: 306 GDALSALWIPCNEYGS-KFVDPLQVVCGAAHTIIVAHSGYGLWPSGTGRSGALGSGNTVD 130
           GDA+S L I C+   S KF+DP+QV CGAAHT+IVAH GY LW  G GRSG LG+G  VD
Sbjct: 363 GDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVD 422

Query: 129 SYAPCSVI*PPLDEDF-QDALEFAGEETRIQDEEPG*LAETDKK 1
            + P  V+ PPL+EDF Q+  E   EE ++++ +   + E +KK
Sbjct: 423 CFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKIEEVTEENKK 466


>ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 581

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = -1

Query: 306 GDALSALWIPCNEYGS-KFVDPLQVVCGAAHTIIVAHSGYGLWPSGTGRSGALGSGNTVD 130
           GDA+S L I C+   S KF+DP+QV CGAAHT+IVAH GY LW  G GRSG LG+G  VD
Sbjct: 363 GDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVD 422

Query: 129 SYAPCSVI*PPLDEDF-QDALEFAGEETRIQDEE 31
            + P  V+ PPL+EDF Q+  E   EE ++++ +
Sbjct: 423 CFTPTVVLWPPLNEDFDQEETETKCEEDKVEENK 456


>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 564

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/104 (50%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
 Frame = -1

Query: 306 GDALSALWIPCNEYGSKFVDPLQVVCGAAHTIIVAHSGYGLWPSGTGRSGALGSGNTVDS 127
           GDA S L      YGSKF DP+QV CGAAHT++VA  GY LW  G GRSG LG+G TVD 
Sbjct: 362 GDAPSPLL-----YGSKFRDPVQVACGAAHTVLVADDGYKLWSWGRGRSGVLGNGKTVDC 416

Query: 126 YAPCSVI*PPLDEDFQDALE--FAGEETRIQDEEPG*LAETDKK 1
           +AP +V+ PPL EDF++ LE      E +I++++P  + E +K+
Sbjct: 417 FAPSTVLWPPLTEDFKE-LESGTTSGEKKIENKDPEEVTEMEKR 459


>ref|XP_003545609.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 576

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -1

Query: 309 AGDALSALWIPCNEYGSKFVDPLQVVCGAAHTIIVAHSGYGLWPSGTGRSGALGSGNTVD 130
           +GDALS   I CN +  KF  P+QV CGAAHT+I+AH G  LW  G GRSG LG+G T+D
Sbjct: 370 SGDALSPFLISCNPHQPKFSQPVQVACGAAHTVIIAHEGCKLWSWGRGRSGVLGNGKTMD 429

Query: 129 SYAPCSVI*PPLDEDF-QDALEFAGEETRIQDEE 31
           SY P  V+ PPL EDF Q+ L  + E  + + +E
Sbjct: 430 SYTPTIVLWPPLMEDFKQEELYSSCEHDKNETKE 463


>emb|CAK22423.1| regulator of chromosome condensation family protein [Beta vulgaris]
          Length = 573

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/103 (47%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = -1

Query: 306 GDALSALWIPCNE-YGSKFVDPLQVVCGAAHTIIVAHSGYGLWPSGTGRSGALGSGNTVD 130
           GDA+  L I CN   G KF +P+ + CGAAHT++VA  GY LW  G GRSG LG G   D
Sbjct: 364 GDAILPLQILCNRPQGPKFPEPVGIACGAAHTVLVADDGYKLWSWGRGRSGVLGDGKGSD 423

Query: 129 SYAPCSVI*PPLDEDFQDALEFAGEETRIQDEEPG*LAETDKK 1
           SY+P  V+ PPL EDF+D L     E++ + E+   + E D+K
Sbjct: 424 SYSPSMVLWPPLSEDFKDGLNSPDTESK-KPEKKAEVTEVDEK 465