BLASTX nr result
ID: Coptis23_contig00029214
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029214 (282 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251... 60 3e-14 emb|CBI25573.3| unnamed protein product [Vitis vinifera] 60 3e-14 ref|XP_002531448.1| conserved hypothetical protein [Ricinus comm... 60 6e-13 ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|2... 59 4e-12 ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein ... 65 5e-12 >ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251745 [Vitis vinifera] Length = 573 Score = 60.5 bits (145), Expect(2) = 3e-14 Identities = 25/37 (67%), Positives = 30/37 (81%) Frame = -2 Query: 281 CYGVQFSVMVPIASKPFGFKHFSVIYNFILLGSPLGA 171 CYGVQFS+MVP S+ FG KHF + YNF+ LG+PLGA Sbjct: 454 CYGVQFSIMVPTVSELFGLKHFGIFYNFMSLGNPLGA 490 Score = 42.4 bits (98), Expect(2) = 3e-14 Identities = 21/30 (70%), Positives = 23/30 (76%) Frame = -1 Query: 171 ALFISGGLAGCVYDKEATKQQGLNLLSSSV 82 A SG LAG VYD EA KQQG+NLL+SSV Sbjct: 490 AFLFSGLLAGFVYDNEAAKQQGMNLLNSSV 519 >emb|CBI25573.3| unnamed protein product [Vitis vinifera] Length = 512 Score = 60.5 bits (145), Expect(2) = 3e-14 Identities = 25/37 (67%), Positives = 30/37 (81%) Frame = -2 Query: 281 CYGVQFSVMVPIASKPFGFKHFSVIYNFILLGSPLGA 171 CYGVQFS+MVP S+ FG KHF + YNF+ LG+PLGA Sbjct: 393 CYGVQFSIMVPTVSELFGLKHFGIFYNFMSLGNPLGA 429 Score = 42.4 bits (98), Expect(2) = 3e-14 Identities = 21/30 (70%), Positives = 23/30 (76%) Frame = -1 Query: 171 ALFISGGLAGCVYDKEATKQQGLNLLSSSV 82 A SG LAG VYD EA KQQG+NLL+SSV Sbjct: 429 AFLFSGLLAGFVYDNEAAKQQGMNLLNSSV 458 >ref|XP_002531448.1| conserved hypothetical protein [Ricinus communis] gi|223528941|gb|EEF30935.1| conserved hypothetical protein [Ricinus communis] Length = 570 Score = 60.5 bits (145), Expect(2) = 6e-13 Identities = 24/37 (64%), Positives = 30/37 (81%) Frame = -2 Query: 281 CYGVQFSVMVPIASKPFGFKHFSVIYNFILLGSPLGA 171 CYGVQFS+M+P S+ FG KHF + YNFI +G+PLGA Sbjct: 450 CYGVQFSIMIPTVSELFGLKHFGIFYNFISIGNPLGA 486 Score = 38.1 bits (87), Expect(2) = 6e-13 Identities = 19/31 (61%), Positives = 21/31 (67%) Frame = -1 Query: 171 ALFISGGLAGCVYDKEATKQQGLNLLSSSVI 79 A SG LAG +YD EA KQQG+NLL S I Sbjct: 486 AFLFSGLLAGYIYDTEAAKQQGMNLLLGSSI 516 >ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|222872939|gb|EEF10070.1| predicted protein [Populus trichocarpa] Length = 580 Score = 59.3 bits (142), Expect(2) = 4e-12 Identities = 24/37 (64%), Positives = 30/37 (81%) Frame = -2 Query: 281 CYGVQFSVMVPIASKPFGFKHFSVIYNFILLGSPLGA 171 CYGVQFS+M+P S+ FG KHF + YNF+ LG+PLGA Sbjct: 453 CYGVQFSIMIPTVSELFGLKHFGLFYNFMSLGNPLGA 489 Score = 36.6 bits (83), Expect(2) = 4e-12 Identities = 22/34 (64%), Positives = 23/34 (67%) Frame = -1 Query: 171 ALFISGGLAGCVYDKEATKQQGLNLLSSSVILSC 70 A SG LAG VYD EA KQQ NLLS+S I SC Sbjct: 489 AFLFSGLLAGYVYDNEAAKQQVPNLLSNSSI-SC 521 >ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein YMR155W [Vitis vinifera] gi|297743570|emb|CBI36437.3| unnamed protein product [Vitis vinifera] Length = 564 Score = 65.5 bits (158), Expect(2) = 5e-12 Identities = 28/37 (75%), Positives = 33/37 (89%) Frame = -2 Query: 281 CYGVQFSVMVPIASKPFGFKHFSVIYNFILLGSPLGA 171 CYGVQFS+MVP AS+ FG KHF VIYNF+LLG+P+GA Sbjct: 451 CYGVQFSIMVPCASELFGLKHFGVIYNFMLLGNPIGA 487 Score = 30.0 bits (66), Expect(2) = 5e-12 Identities = 16/29 (55%), Positives = 17/29 (58%) Frame = -1 Query: 171 ALFISGGLAGCVYDKEATKQQGLNLLSSS 85 AL SG LAG VYD EA KQQ L + Sbjct: 487 ALLFSGLLAGYVYDFEAAKQQSSTCLGGT 515