BLASTX nr result

ID: Coptis23_contig00029214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029214
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251...    60   3e-14
emb|CBI25573.3| unnamed protein product [Vitis vinifera]               60   3e-14
ref|XP_002531448.1| conserved hypothetical protein [Ricinus comm...    60   6e-13
ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-12
ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein ...    65   5e-12

>ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251745 [Vitis vinifera]
          Length = 573

 Score = 60.5 bits (145), Expect(2) = 3e-14
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -2

Query: 281 CYGVQFSVMVPIASKPFGFKHFSVIYNFILLGSPLGA 171
           CYGVQFS+MVP  S+ FG KHF + YNF+ LG+PLGA
Sbjct: 454 CYGVQFSIMVPTVSELFGLKHFGIFYNFMSLGNPLGA 490



 Score = 42.4 bits (98), Expect(2) = 3e-14
 Identities = 21/30 (70%), Positives = 23/30 (76%)
 Frame = -1

Query: 171 ALFISGGLAGCVYDKEATKQQGLNLLSSSV 82
           A   SG LAG VYD EA KQQG+NLL+SSV
Sbjct: 490 AFLFSGLLAGFVYDNEAAKQQGMNLLNSSV 519


>emb|CBI25573.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 60.5 bits (145), Expect(2) = 3e-14
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -2

Query: 281 CYGVQFSVMVPIASKPFGFKHFSVIYNFILLGSPLGA 171
           CYGVQFS+MVP  S+ FG KHF + YNF+ LG+PLGA
Sbjct: 393 CYGVQFSIMVPTVSELFGLKHFGIFYNFMSLGNPLGA 429



 Score = 42.4 bits (98), Expect(2) = 3e-14
 Identities = 21/30 (70%), Positives = 23/30 (76%)
 Frame = -1

Query: 171 ALFISGGLAGCVYDKEATKQQGLNLLSSSV 82
           A   SG LAG VYD EA KQQG+NLL+SSV
Sbjct: 429 AFLFSGLLAGFVYDNEAAKQQGMNLLNSSV 458


>ref|XP_002531448.1| conserved hypothetical protein [Ricinus communis]
           gi|223528941|gb|EEF30935.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 570

 Score = 60.5 bits (145), Expect(2) = 6e-13
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -2

Query: 281 CYGVQFSVMVPIASKPFGFKHFSVIYNFILLGSPLGA 171
           CYGVQFS+M+P  S+ FG KHF + YNFI +G+PLGA
Sbjct: 450 CYGVQFSIMIPTVSELFGLKHFGIFYNFISIGNPLGA 486



 Score = 38.1 bits (87), Expect(2) = 6e-13
 Identities = 19/31 (61%), Positives = 21/31 (67%)
 Frame = -1

Query: 171 ALFISGGLAGCVYDKEATKQQGLNLLSSSVI 79
           A   SG LAG +YD EA KQQG+NLL  S I
Sbjct: 486 AFLFSGLLAGYIYDTEAAKQQGMNLLLGSSI 516


>ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|222872939|gb|EEF10070.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 59.3 bits (142), Expect(2) = 4e-12
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -2

Query: 281 CYGVQFSVMVPIASKPFGFKHFSVIYNFILLGSPLGA 171
           CYGVQFS+M+P  S+ FG KHF + YNF+ LG+PLGA
Sbjct: 453 CYGVQFSIMIPTVSELFGLKHFGLFYNFMSLGNPLGA 489



 Score = 36.6 bits (83), Expect(2) = 4e-12
 Identities = 22/34 (64%), Positives = 23/34 (67%)
 Frame = -1

Query: 171 ALFISGGLAGCVYDKEATKQQGLNLLSSSVILSC 70
           A   SG LAG VYD EA KQQ  NLLS+S I SC
Sbjct: 489 AFLFSGLLAGYVYDNEAAKQQVPNLLSNSSI-SC 521


>ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein YMR155W [Vitis
           vinifera] gi|297743570|emb|CBI36437.3| unnamed protein
           product [Vitis vinifera]
          Length = 564

 Score = 65.5 bits (158), Expect(2) = 5e-12
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = -2

Query: 281 CYGVQFSVMVPIASKPFGFKHFSVIYNFILLGSPLGA 171
           CYGVQFS+MVP AS+ FG KHF VIYNF+LLG+P+GA
Sbjct: 451 CYGVQFSIMVPCASELFGLKHFGVIYNFMLLGNPIGA 487



 Score = 30.0 bits (66), Expect(2) = 5e-12
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = -1

Query: 171 ALFISGGLAGCVYDKEATKQQGLNLLSSS 85
           AL  SG LAG VYD EA KQQ    L  +
Sbjct: 487 ALLFSGLLAGYVYDFEAAKQQSSTCLGGT 515


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