BLASTX nr result

ID: Coptis23_contig00029213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029213
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]         81   8e-14
ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea ma...    81   8e-14
ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
emb|CBI40338.3| unnamed protein product [Vitis vinifera]               79   4e-13

>gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = -2

Query: 410 CHNAFTFISKIVDHEIIVRDSSRFHHFKKGSCSCRGYW 297
           CH+AFT+ISKIVDHEIIVRDSSRFHHFK GSCSC GYW
Sbjct: 849 CHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886


>ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea mays]
           gi|238007188|gb|ACR34629.1| unknown [Zea mays]
          Length = 329

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = -2

Query: 410 CHNAFTFISKIVDHEIIVRDSSRFHHFKKGSCSCRGYW 297
           CH+AFT+ISKIVDHEIIVRDSSRFHHFK GSCSC GYW
Sbjct: 292 CHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 329


>ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -2

Query: 410 CHNAFTFISKIVDHEIIVRDSSRFHHFKKGSCSCRGYW 297
           CHNA T+IS I+DHEII+RDSSRFHHFKKGSCSC GYW
Sbjct: 502 CHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539


>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = -2

Query: 410 CHNAFTFISKIVDHEIIVRDSSRFHHFKKGSCSCRGYW 297
           CH+AFT+IS I++HEIIVRDSSRFHHFK GSCSCRGYW
Sbjct: 815 CHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852


>emb|CBI40338.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = -2

Query: 410 CHNAFTFISKIVDHEIIVRDSSRFHHFKKGSCSCRGYW 297
           CH+AFT+IS I++HEIIVRDSSRFHHFK GSCSCRGYW
Sbjct: 450 CHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 487


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