BLASTX nr result
ID: Coptis23_contig00029213
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029213 (441 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays] 81 8e-14 ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea ma... 81 8e-14 ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2... 79 3e-13 ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi... 79 4e-13 emb|CBI40338.3| unnamed protein product [Vitis vinifera] 79 4e-13 >gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays] Length = 886 Score = 81.3 bits (199), Expect = 8e-14 Identities = 34/38 (89%), Positives = 36/38 (94%) Frame = -2 Query: 410 CHNAFTFISKIVDHEIIVRDSSRFHHFKKGSCSCRGYW 297 CH+AFT+ISKIVDHEIIVRDSSRFHHFK GSCSC GYW Sbjct: 849 CHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886 >ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea mays] gi|238007188|gb|ACR34629.1| unknown [Zea mays] Length = 329 Score = 81.3 bits (199), Expect = 8e-14 Identities = 34/38 (89%), Positives = 36/38 (94%) Frame = -2 Query: 410 CHNAFTFISKIVDHEIIVRDSSRFHHFKKGSCSCRGYW 297 CH+AFT+ISKIVDHEIIVRDSSRFHHFK GSCSC GYW Sbjct: 292 CHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 329 >ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa] Length = 539 Score = 79.3 bits (194), Expect = 3e-13 Identities = 32/38 (84%), Positives = 35/38 (92%) Frame = -2 Query: 410 CHNAFTFISKIVDHEIIVRDSSRFHHFKKGSCSCRGYW 297 CHNA T+IS I+DHEII+RDSSRFHHFKKGSCSC GYW Sbjct: 502 CHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539 >ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like [Vitis vinifera] Length = 852 Score = 79.0 bits (193), Expect = 4e-13 Identities = 32/38 (84%), Positives = 36/38 (94%) Frame = -2 Query: 410 CHNAFTFISKIVDHEIIVRDSSRFHHFKKGSCSCRGYW 297 CH+AFT+IS I++HEIIVRDSSRFHHFK GSCSCRGYW Sbjct: 815 CHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852 >emb|CBI40338.3| unnamed protein product [Vitis vinifera] Length = 487 Score = 79.0 bits (193), Expect = 4e-13 Identities = 32/38 (84%), Positives = 36/38 (94%) Frame = -2 Query: 410 CHNAFTFISKIVDHEIIVRDSSRFHHFKKGSCSCRGYW 297 CH+AFT+IS I++HEIIVRDSSRFHHFK GSCSCRGYW Sbjct: 450 CHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 487