BLASTX nr result

ID: Coptis23_contig00029212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029212
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280354.2| PREDICTED: uncharacterized protein LOC100254...    80   2e-13
emb|CAN77379.1| hypothetical protein VITISV_043864 [Vitis vinifera]    80   2e-13
ref|XP_002275999.1| PREDICTED: uncharacterized protein LOC100245...    76   3e-12
emb|CAN63568.1| hypothetical protein VITISV_043429 [Vitis vinifera]    76   4e-12
emb|CBI26064.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|XP_002280354.2| PREDICTED: uncharacterized protein LOC100254594 [Vitis vinifera]
          Length = 954

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
 Frame = +2

Query: 50   QSIRINGPKQPNVPMDSPKDGDTSMPG-----RNPGMIKCQFSRRRKHGQSNSIAPVTKR 214
            Q +  N P      +++ +D +T+        RN   IK QFSRR K G SN +AP+ KR
Sbjct: 670  QRVSTNSPDAAKKLVENNQDQNTNTSDDKHLRRN---IKHQFSRRTKSGHSNYLAPLIKR 726

Query: 215  RRLTACSREDATHSEKAICVDPKMREKELLYQMGSSDGD-NTCSEVGSYCDKGFTNFSAK 391
            RRLTAC++ + + +E ++ V P  ++++    +GSS+   N  S+ G    +  ++ S+ 
Sbjct: 727  RRLTACAKAETSRAE-SLSVGPLSKQEKSHCMLGSSEASKNDVSQEGPSPREKASSISSS 785

Query: 392  D--IPGD-TTELGSNCFSTEASHETN---PPRSLIDLNLLPHVSPDFESCETSATKIENK 553
            D   P D T  LG      + SHE N     R LIDLN LP V  D E+ E  AT +EN 
Sbjct: 786  DGGSPEDETVILGGTSVGMDLSHEKNDKPQTRPLIDLN-LPQVPSDSENGERLATNVENS 844

Query: 554  E 556
            +
Sbjct: 845  Q 845


>emb|CAN77379.1| hypothetical protein VITISV_043864 [Vitis vinifera]
          Length = 958

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
 Frame = +2

Query: 50   QSIRINGPKQPNVPMDSPKDGDTSMPG-----RNPGMIKCQFSRRRKHGQSNSIAPVTKR 214
            Q +  N P      +++ +D +T+        RN   IK QFSRR K G SN +AP+ KR
Sbjct: 651  QRVSTNSPDAAKKLVENNQDQNTNTSDDKHLRRN---IKHQFSRRTKSGHSNYLAPLIKR 707

Query: 215  RRLTACSREDATHSEKAICVDPKMREKELLYQMGSSDGD-NTCSEVGSYCDKGFTNFSAK 391
            RRLTAC++ + + +E ++ V P  ++++    +GSS+   N  S+ G    +  ++ S+ 
Sbjct: 708  RRLTACAKAETSRAE-SLSVGPLSKQEKSHCMLGSSEASKNDVSQEGPSPREKASSISSS 766

Query: 392  D--IPGD-TTELGSNCFSTEASHETN---PPRSLIDLNLLPHVSPDFESCETSATKIENK 553
            D   P D T  LG      + SHE N     R LIDLN LP V  D E+ E  AT +EN 
Sbjct: 767  DGGSPEDETVILGGTSVGMDLSHEKNDKPQTRPLIDLN-LPQVPSDSENGERLATNVENS 825

Query: 554  E 556
            +
Sbjct: 826  Q 826


>ref|XP_002275999.1| PREDICTED: uncharacterized protein LOC100245979 [Vitis vinifera]
          Length = 894

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 61/177 (34%), Positives = 83/177 (46%), Gaps = 7/177 (3%)
 Frame = +2

Query: 50   QSIRINGPKQPNVPMDSPKDGDTSMPG--RNPGMIKCQFSRRRKHGQSNSIAPVTKRRR- 220
            Q I  N P   ++P   PK  +T+M    +     KC   R+ K   SN +APVTKRRR 
Sbjct: 590  QGIPTNDPDSTSLPAKVPKSQNTNMYNAKKQSRAPKCHLGRKMKPDMSNYLAPVTKRRRR 649

Query: 221  LTACSREDATHSEKAICVDPKMREKELLYQMGSSDGDNT--CSEVGSYCDKGFTNFSAKD 394
            LTACSR + + S     V P+++++E    +G  D D    C  V        ++ S KD
Sbjct: 650  LTACSRAETSQSTITFLVGPELKQEESGGCIGKHDSDEIIHCKVVPLTEKLCSSSSSCKD 709

Query: 395  --IPGDTTELGSNCFSTEASHETNPPRSLIDLNLLPHVSPDFESCETSATKIENKED 559
              I G    L SNC   E   E    R++IDLNL   V PD E+ E        ++D
Sbjct: 710  SRIDGREGMLSSNCSGAEHPREELQFRTMIDLNL--PVLPDAETGEPVLVASSERQD 764


>emb|CAN63568.1| hypothetical protein VITISV_043429 [Vitis vinifera]
          Length = 885

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 61/177 (34%), Positives = 83/177 (46%), Gaps = 7/177 (3%)
 Frame = +2

Query: 50   QSIRINGPKQPNVPMDSPKDGDTSMPG--RNPGMIKCQFSRRRKHGQSNSIAPVTKRRR- 220
            Q I  N P   ++P   PK  +T+M    +     KC   R+ K   SN +APVTKRRR 
Sbjct: 635  QGIPTNDPDSTSLPAKVPKSQNTNMYNAKKQSRAPKCXLGRKMKPDMSNYLAPVTKRRRR 694

Query: 221  LTACSREDATHSEKAICVDPKMREKELLYQMGSSDGDNT--CSEVGSYCDKGFTNFSAKD 394
            LTACSR + + S     V P+++++E    +G  D D    C  V        ++ S KD
Sbjct: 695  LTACSRAETSQSTITFLVGPELKQEESGGCIGKHDSDEIIHCKVVPLTEKLCSSSSSCKD 754

Query: 395  --IPGDTTELGSNCFSTEASHETNPPRSLIDLNLLPHVSPDFESCETSATKIENKED 559
              I G    L SNC   E   E    R++IDLNL   V PD E+ E        ++D
Sbjct: 755  SRIDGREGMLSSNCSGAEHPREELQFRTMIDLNL--PVLPDAETGEPVLVASSERQD 809


>emb|CBI26064.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
 Frame = +2

Query: 5    NSSKPDKNPDKIMKVQSIRINGPKQPNVPMDSPKDGDTSMPG--RNPGMIKCQFSRRRKH 178
            +SS  ++N +   +   +  +     ++P   PK  +T+M    +     KC   R+ K 
Sbjct: 501  SSSHFEENDEDTSEELVVDESNSDSTSLPAKVPKSQNTNMYNAKKQSRAPKCHLGRKMKP 560

Query: 179  GQSNSIAPVTKRRR-LTACSREDATHSEKAICVDPKMREKELLYQMGSSDGDNT--CSEV 349
              SN +APVTKRRR LTACSR + + S     V P+++++E    +G  D D    C  V
Sbjct: 561  DMSNYLAPVTKRRRRLTACSRAETSQSTITFLVGPELKQEESGGCIGKHDSDEIIHCKVV 620

Query: 350  GSYCDKGFTNFSAKD--IPGDTTELGSNCFSTEASHETNPPRSLIDLNLLPHVSPDFESC 523
                    ++ S KD  I G    L SNC   E   E    R++IDLNL   V PD E+ 
Sbjct: 621  PLTEKLCSSSSSCKDSRIDGREGMLSSNCSGAEHPREELQFRTMIDLNL--PVLPDAETG 678

Query: 524  ETSATKIENKED 559
            E        ++D
Sbjct: 679  EPVLVASSERQD 690


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