BLASTX nr result

ID: Coptis23_contig00029206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029206
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509934.1| transcription factor, putative [Ricinus comm...   107   1e-21
dbj|BAA32827.1| 98b [Daucus carota]                                   103   1e-20
ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit...   102   4e-20
ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-...   102   4e-20
emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera]   101   5e-20

>ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
           gi|223549833|gb|EEF51321.1| transcription factor,
           putative [Ricinus communis]
          Length = 514

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/73 (67%), Positives = 59/73 (80%)
 Frame = +3

Query: 45  DPNKPKRPASSFILFSKEMRKNIVQERPEISNATLNALISVKWKELNETEKEIWXXXXXX 224
           DPNKPK+PASSF++FSKE RKN+ QERP I+N+TLNALISVKWKEL+E E++IW      
Sbjct: 432 DPNKPKKPASSFLIFSKEARKNLAQERPVINNSTLNALISVKWKELSEEERQIWNAKAAE 491

Query: 225 XXXXYKKEMQEYN 263
               YKKEM+EYN
Sbjct: 492 AMEIYKKEMEEYN 504


>dbj|BAA32827.1| 98b [Daucus carota]
          Length = 502

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/73 (65%), Positives = 57/73 (78%)
 Frame = +3

Query: 45  DPNKPKRPASSFILFSKEMRKNIVQERPEISNATLNALISVKWKELNETEKEIWXXXXXX 224
           DPNKPKRPASSF+LFSKE RK I +ERP I+N+TLNALISVKWKE++  EK++W      
Sbjct: 414 DPNKPKRPASSFLLFSKEARKTISEERPGINNSTLNALISVKWKEISHEEKQLWNEKAAG 473

Query: 225 XXXXYKKEMQEYN 263
               YKKEM+EYN
Sbjct: 474 AMEAYKKEMEEYN 486


>ref|XP_004162361.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
           13-like [Cucumis sativus]
          Length = 500

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/73 (61%), Positives = 60/73 (82%)
 Frame = +3

Query: 45  DPNKPKRPASSFILFSKEMRKNIVQERPEISNATLNALISVKWKELNETEKEIWXXXXXX 224
           DPNKPK+PASS+ILFSKE RK++++E+P +SN+T+NALISVKWKEL+E E++IW      
Sbjct: 412 DPNKPKKPASSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAE 471

Query: 225 XXXXYKKEMQEYN 263
               YKKE++EYN
Sbjct: 472 AMEGYKKEVEEYN 484


>ref|XP_004149754.1| PREDICTED: high mobility group B protein 13-like [Cucumis sativus]
          Length = 500

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/73 (61%), Positives = 60/73 (82%)
 Frame = +3

Query: 45  DPNKPKRPASSFILFSKEMRKNIVQERPEISNATLNALISVKWKELNETEKEIWXXXXXX 224
           DPNKPK+PASS+ILFSKE RK++++E+P +SN+T+NALISVKWKEL+E E++IW      
Sbjct: 412 DPNKPKKPASSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAE 471

Query: 225 XXXXYKKEMQEYN 263
               YKKE++EYN
Sbjct: 472 AMEGYKKEVEEYN 484


>emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera]
          Length = 532

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/73 (63%), Positives = 59/73 (80%)
 Frame = +3

Query: 45  DPNKPKRPASSFILFSKEMRKNIVQERPEISNATLNALISVKWKELNETEKEIWXXXXXX 224
           DPNKPK+PASSF+LFSKE R++ +QERP I+N+TLNALISVKWKEL+E E++IW      
Sbjct: 448 DPNKPKKPASSFLLFSKEARRSFLQERPGINNSTLNALISVKWKELDEQERKIWNDKAKE 507

Query: 225 XXXXYKKEMQEYN 263
               Y+KE++EYN
Sbjct: 508 AMEAYQKELEEYN 520


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