BLASTX nr result
ID: Coptis23_contig00029203
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00029203
(1223 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276411.1| PREDICTED: uncharacterized protein LOC100246... 646 0.0
emb|CAN75217.1| hypothetical protein VITISV_003518 [Vitis vinifera] 616 e-174
ref|XP_002300355.1| predicted protein [Populus trichocarpa] gi|2... 616 e-174
ref|XP_002529043.1| conserved hypothetical protein [Ricinus comm... 605 e-171
ref|XP_003600250.1| Nucleotide-binding oligomerization domain-co... 592 e-167
>ref|XP_002276411.1| PREDICTED: uncharacterized protein LOC100246876 [Vitis vinifera]
Length = 1386
Score = 646 bits (1666), Expect = 0.0
Identities = 317/407 (77%), Positives = 357/407 (87%)
Frame = -2
Query: 1222 LDMTGIRLKSKWAKEFRWVLEQNQSLREVNLSTTCLKDKGVIYVAAGLFKNKYLESLYLN 1043
LD+TG+RL+S+WAKEFR VLEQNQSL+EV LS TCLKDKGV+YVAAGLFKN+ LESLYL+
Sbjct: 266 LDLTGVRLRSRWAKEFRLVLEQNQSLKEVTLSKTCLKDKGVVYVAAGLFKNQSLESLYLD 325
Query: 1042 ENWFSGIGVEHLLCPLSRFSALQNQANTTLKSVTFGGGRTKVGRDGLVAILQMLTTNQSL 863
NWF+GIGVEHLLCPLSRFSALQ QAN TLKSVTFGGGRTK+GRDGL AILQMLTTNQS+
Sbjct: 326 GNWFTGIGVEHLLCPLSRFSALQYQANVTLKSVTFGGGRTKIGRDGLAAILQMLTTNQSV 385
Query: 862 VRLGIYDDKSLGQEDFIRIFRSLENNATLRYLSLQGCKGVQGDLMVKTIMETLQINPYIE 683
RLGI DD+SL QED ++IFRSLE NATLR+LSLQGCKGV G+L+++TIMETLQ+NP+IE
Sbjct: 386 TRLGIQDDESLRQEDIVKIFRSLERNATLRHLSLQGCKGVGGELVLQTIMETLQVNPWIE 445
Query: 682 DIDLTRTPLQSSGKTEGIYQKLGQNGRIEPEMDLLKDMPLAMPKSCRVFLCGQEFAGKST 503
DIDLTRTPLQ+SG+T+GIYQKLGQNGR EPE+DLLKDMPL +PKSCRVF CGQE+AGK+T
Sbjct: 446 DIDLTRTPLQNSGQTDGIYQKLGQNGRTEPEIDLLKDMPLTVPKSCRVFFCGQEYAGKTT 505
Query: 502 LCNSISQNFSSPKLPYLDQVRTLVHPVEQAVRTVGXXXXXXXXXXXXXXIWDLAGQHEFY 323
LCNSISQNFSS KLPY+DQVRTLV+PVEQAVRT G IW+LAGQHEFY
Sbjct: 506 LCNSISQNFSSSKLPYMDQVRTLVNPVEQAVRTAGMKVKTFKDEDTKISIWNLAGQHEFY 565
Query: 322 TLHDLMFPGHGSASCFLIISSLFRKPQNREQKNPAEIEEDLLYWLRFIVSNSKRAGSQAM 143
+LHDLMFPGHGSAS FLI+SSLFRKP NRE K PAEIEEDL YWLRFIVSNS+RA Q M
Sbjct: 566 SLHDLMFPGHGSASFFLIVSSLFRKPTNRESKTPAEIEEDLQYWLRFIVSNSRRAAQQCM 625
Query: 142 LPSVTVVLTHFDKITQSSDSFQITIRLIQSLRERFQGFVEFYSTVFT 2
LP+VTVVLTH+DKI Q S FQ T+ IQ LR++FQGFV+FY TVFT
Sbjct: 626 LPNVTVVLTHYDKINQPSQDFQATVNSIQRLRDKFQGFVDFYPTVFT 672
>emb|CAN75217.1| hypothetical protein VITISV_003518 [Vitis vinifera]
Length = 1400
Score = 616 bits (1589), Expect = e-174
Identities = 311/418 (74%), Positives = 350/418 (83%), Gaps = 11/418 (2%)
Frame = -2
Query: 1222 LDMTGIRLKSKWAKEFRWVLEQNQSLREVNLSTTCLKDKGVIYVAAGLFKNKYLESLYLN 1043
LD+TG+RL+S+WAKEFR VLEQNQSL+EV LS TCLKDKGV+YVAAGLFKN+ LESLYL+
Sbjct: 266 LDLTGVRLRSRWAKEFRLVLEQNQSLKEVTLSKTCLKDKGVVYVAAGLFKNQSLESLYLD 325
Query: 1042 ENWFSGIGVEHLLCPLSRFSALQNQANTTLKSVTFGGGRTKVGRDGLVAILQMLTTNQSL 863
NWF+GIGVEHLLCPLSRFSALQ QAN TLKSVTFGGGRTK+GRDGL AILQMLTTNQS+
Sbjct: 326 GNWFTGIGVEHLLCPLSRFSALQYQANVTLKSVTFGGGRTKIGRDGLAAILQMLTTNQSV 385
Query: 862 VRLGIYDDKSLGQEDFIRIFRSLENNATLRYLSLQGCKGVQGDLMVKTIMETLQINPYIE 683
RLGI DD+SL QED ++IFRSLE NATLR+LSLQGCKGV G+L+++TIMETLQ+NP+IE
Sbjct: 386 TRLGIQDDESLRQEDIVKIFRSLERNATLRHLSLQGCKGVGGELVLQTIMETLQVNPWIE 445
Query: 682 DIDLTRTPLQSSGKTEGIYQKLGQNGRIEPEMDLLKDMPLAMPKSCRVFLCGQEFAG--- 512
DIDLTRTPLQ+SG+T+GIYQKLGQNGR EPE+DLLKDMPL +PKSCRVF CGQE+A
Sbjct: 446 DIDLTRTPLQNSGQTDGIYQKLGQNGRTEPEIDLLKDMPLTVPKSCRVFFCGQEYAAIPF 505
Query: 511 ---KSTL-----CNSISQNFSSPKLPYLDQVRTLVHPVEQAVRTVGXXXXXXXXXXXXXX 356
KS L QNFSS KLPY+DQVRTLV+PVEQAVRT G
Sbjct: 506 KAQKSRLRLIEFLKLQVQNFSSSKLPYMDQVRTLVNPVEQAVRTAGMKVKTFKDEDTKIS 565
Query: 355 IWDLAGQHEFYTLHDLMFPGHGSASCFLIISSLFRKPQNREQKNPAEIEEDLLYWLRFIV 176
IW+LAGQHEFY+LHDLMFPGHGSAS FLI+SSLFRKP NRE K PAEIEEDL YWLRFIV
Sbjct: 566 IWNLAGQHEFYSLHDLMFPGHGSASFFLIVSSLFRKPTNRESKTPAEIEEDLQYWLRFIV 625
Query: 175 SNSKRAGSQAMLPSVTVVLTHFDKITQSSDSFQITIRLIQSLRERFQGFVEFYSTVFT 2
SNS+RA Q MLP+VTVVLTH+DKI Q S FQ T+ IQ LR++FQGFV+FY TVFT
Sbjct: 626 SNSRRAAQQCMLPNVTVVLTHYDKINQPSQDFQATVNSIQRLRDKFQGFVDFYPTVFT 683
>ref|XP_002300355.1| predicted protein [Populus trichocarpa] gi|222847613|gb|EEE85160.1|
predicted protein [Populus trichocarpa]
Length = 1404
Score = 616 bits (1588), Expect = e-174
Identities = 297/409 (72%), Positives = 351/409 (85%), Gaps = 2/409 (0%)
Frame = -2
Query: 1222 LDMTGIRLKSKWAKEFRWVLEQNQSLREVNLSTTCLKDKGVIYVAAGLFKNKYLESLYLN 1043
LDMTG+RLKS+WAKEFRWVLEQN+SL+EV LS T LKDKGV+YVAAGLFKN+ LESLYL+
Sbjct: 266 LDMTGVRLKSRWAKEFRWVLEQNRSLKEVRLSKTSLKDKGVVYVAAGLFKNQCLESLYLD 325
Query: 1042 ENWFSGIGVEHLLCPLSRFSALQNQANTTLKSVTFGGGRTKVGRDGLVAILQMLTTNQSL 863
NWFSGIGVEHLLCPLSRFSALQ QAN TLKSVTFGGG+T++GRDGL +I+QMLTTN+S+
Sbjct: 326 GNWFSGIGVEHLLCPLSRFSALQYQANITLKSVTFGGGKTRIGRDGLASIMQMLTTNESV 385
Query: 862 VRLGIYDDKSLGQEDFIRIFRSLENNATLRYLSLQGCKGVQGDLMVKTIMETLQINPYIE 683
++LGIYDD+SLG +DF++IF+SLE NATLRYLSLQGC+GV+GD+++ +IM+TLQ+NP+IE
Sbjct: 386 IKLGIYDDESLGADDFVKIFKSLERNATLRYLSLQGCRGVRGDVVLDSIMQTLQVNPWIE 445
Query: 682 DIDLTRTPLQSSGKTEGIYQKLGQNGR--IEPEMDLLKDMPLAMPKSCRVFLCGQEFAGK 509
DIDL RTPLQ+SGK +GIYQ+LGQNG+ +E + DL KDMPL PKSCRVF CGQE+AGK
Sbjct: 446 DIDLARTPLQNSGKADGIYQRLGQNGKTELETDTDLFKDMPLTEPKSCRVFFCGQEYAGK 505
Query: 508 STLCNSISQNFSSPKLPYLDQVRTLVHPVEQAVRTVGXXXXXXXXXXXXXXIWDLAGQHE 329
+ LCNSISQNFSS KLPY+DQVR LV+PVEQAVR G IW+L GQH+
Sbjct: 506 TALCNSISQNFSSSKLPYIDQVRNLVNPVEQAVRASGMKIKTFRDEGTKISIWNLGGQHD 565
Query: 328 FYTLHDLMFPGHGSASCFLIISSLFRKPQNREQKNPAEIEEDLLYWLRFIVSNSKRAGSQ 149
FY+LHDLMFPGHGSAS FLIISSLFRKP NRE K PAEIEEDL YWLRFIVSNS+RA Q
Sbjct: 566 FYSLHDLMFPGHGSASFFLIISSLFRKPNNREPKTPAEIEEDLQYWLRFIVSNSRRALQQ 625
Query: 148 AMLPSVTVVLTHFDKITQSSDSFQITIRLIQSLRERFQGFVEFYSTVFT 2
MLP+VT+VLTHFDKI Q S + Q+ + IQ +R++FQGF++FY TVFT
Sbjct: 626 CMLPNVTIVLTHFDKINQPSQNLQLAVNSIQRVRDKFQGFIDFYPTVFT 674
>ref|XP_002529043.1| conserved hypothetical protein [Ricinus communis]
gi|223531523|gb|EEF33354.1| conserved hypothetical
protein [Ricinus communis]
Length = 1384
Score = 605 bits (1561), Expect = e-171
Identities = 301/409 (73%), Positives = 346/409 (84%), Gaps = 2/409 (0%)
Frame = -2
Query: 1222 LDMTGIRLKSKWAKEFRWVLEQNQSLREVNLSTTCLKDKGVIYVAAGLFKNKYLESLYLN 1043
LDMTGIRLKS+WAKEFR VLEQN+SL+EV LS TCLKDKGV+YVAAGLFKN+ LESLYL+
Sbjct: 266 LDMTGIRLKSRWAKEFRSVLEQNRSLKEVRLSKTCLKDKGVVYVAAGLFKNQSLESLYLD 325
Query: 1042 ENWFSGIGVEHLLCPLSRFSALQNQANTTLKSVTFGGGRTKVGRDGLVAILQMLTTNQSL 863
NWFSG GVEHLLCPLSRFSALQ QAN TLKSVTFGGGRTK+GRDGL AI+QMLTTN++L
Sbjct: 326 GNWFSGTGVEHLLCPLSRFSALQFQANITLKSVTFGGGRTKIGRDGLAAIIQMLTTNETL 385
Query: 862 VRLGIYDDKSLGQEDFIRIFRSLENNATLRYLSLQGCKGVQGDLMVKTIMETLQINPYIE 683
+LGI DD+SL DF++IFRSLE NA+LR+LSLQGC+GV+GD+++KTIM+TLQ+NP+IE
Sbjct: 386 TKLGICDDESLRPGDFVKIFRSLEKNASLRHLSLQGCRGVRGDIVLKTIMDTLQVNPWIE 445
Query: 682 DIDLTRTPLQSSGKTEGIYQKLGQNGRIEP--EMDLLKDMPLAMPKSCRVFLCGQEFAGK 509
DIDL RTPL + GKT+ IYQ+LGQNG+ EP E DLLKDMPL PKSCRVF CGQE+AGK
Sbjct: 446 DIDLARTPLHNLGKTDEIYQRLGQNGKTEPEAETDLLKDMPLTEPKSCRVFFCGQEYAGK 505
Query: 508 STLCNSISQNFSSPKLPYLDQVRTLVHPVEQAVRTVGXXXXXXXXXXXXXXIWDLAGQHE 329
+ LCNSISQNFSS KLPY+DQVRTLV+PVEQAVRT G IW+LAGQHE
Sbjct: 506 TALCNSISQNFSSSKLPYMDQVRTLVNPVEQAVRTSGMKIKNFKDEDTKISIWNLAGQHE 565
Query: 328 FYTLHDLMFPGHGSASCFLIISSLFRKPQNREQKNPAEIEEDLLYWLRFIVSNSKRAGSQ 149
FY+LHDLMFPGHGSAS FLIISSLFRKP NRE K P EIEEDL YWLR+IVSNS+RA Q
Sbjct: 566 FYSLHDLMFPGHGSASFFLIISSLFRKPSNREPKTPEEIEEDLQYWLRYIVSNSRRAIQQ 625
Query: 148 AMLPSVTVVLTHFDKITQSSDSFQITIRLIQSLRERFQGFVEFYSTVFT 2
MLP+VT+VLTH DKI Q S + Q+ + IQ +R++FQGFV+ Y TVFT
Sbjct: 626 CMLPNVTIVLTHCDKINQPSPNLQLIVTSIQRVRDKFQGFVDLYQTVFT 674
>ref|XP_003600250.1| Nucleotide-binding oligomerization domain-containing protein
[Medicago truncatula] gi|355489298|gb|AES70501.1|
Nucleotide-binding oligomerization domain-containing
protein [Medicago truncatula]
Length = 1380
Score = 592 bits (1525), Expect = e-167
Identities = 289/408 (70%), Positives = 345/408 (84%), Gaps = 1/408 (0%)
Frame = -2
Query: 1222 LDMTGIRLKSKWAKEFRWVLEQNQSLREVNLSTTCLKDKGVIYVAAGLFKNKYLESLYLN 1043
LDMTG+++KSK AKEFRWVLEQNQ+L+EVN S TCLKDKG++Y+AAGLFKN L+ L++
Sbjct: 268 LDMTGVKIKSKCAKEFRWVLEQNQTLKEVNFSRTCLKDKGIVYIAAGLFKNHSLQKLHVA 327
Query: 1042 ENWFSGIGVEHLLCPLSRFSALQNQANTTLKSVTFGGGRTKVGRDGLVAILQMLTTNQSL 863
NWF GIGVEHLLCPLSRFS+LQ QANT+LK VT GGGRT++GRDGLVAI Q L TN+++
Sbjct: 328 GNWFRGIGVEHLLCPLSRFSSLQMQANTSLKCVTLGGGRTRIGRDGLVAITQFLVTNETV 387
Query: 862 VRLGIYDDKSLGQEDFIRIFRSLENNATLRYLSLQGCKGVQGDLMVKTIMETLQINPYIE 683
R GI+DD+SL +DF++IF+SLE NA+L+ LSLQGCKGVQG+++++TIMETLQINP+IE
Sbjct: 388 TRFGIHDDESLKPDDFVKIFKSLEKNASLKCLSLQGCKGVQGEMLLQTIMETLQINPWIE 447
Query: 682 DIDLTRTPLQSSGKTEGIYQKLGQNGRIEPEMDLLKDMPLAMPKSCRVFLCGQEFAGKST 503
+IDLTRTPL +SG++ GIYQ+LGQN EPEMDL+KDMPL PKSCRVF CGQE+AGK+T
Sbjct: 448 EIDLTRTPLHNSGESIGIYQRLGQNENPEPEMDLIKDMPLTEPKSCRVFFCGQEYAGKAT 507
Query: 502 LCNSISQNFS-SPKLPYLDQVRTLVHPVEQAVRTVGXXXXXXXXXXXXXXIWDLAGQHEF 326
LC+SISQNFS S LPYLDQVRT+V+PVEQAV+TVG IW+LAGQHEF
Sbjct: 508 LCHSISQNFSASAALPYLDQVRTIVNPVEQAVKTVGMKIKTFKDEDTKISIWNLAGQHEF 567
Query: 325 YTLHDLMFPGHGSASCFLIISSLFRKPQNREQKNPAEIEEDLLYWLRFIVSNSKRAGSQA 146
++LHDLMFPG GSAS F+IISSLFRKP NRE K+ AEIEEDL YWLRFIVSNSKRAG Q
Sbjct: 568 FSLHDLMFPGSGSASIFIIISSLFRKPSNREPKSTAEIEEDLQYWLRFIVSNSKRAGQQC 627
Query: 145 MLPSVTVVLTHFDKITQSSDSFQITIRLIQSLRERFQGFVEFYSTVFT 2
MLPSV +VLTHFDKI QSS + Q T+ IQ LR++FQG+V+FY TVFT
Sbjct: 628 MLPSVAIVLTHFDKINQSSQNLQQTVDSIQRLRDKFQGYVDFYQTVFT 675