BLASTX nr result

ID: Coptis23_contig00029201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029201
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276231.1| PREDICTED: zinc transporter 6, chloroplastic...   189   3e-46
ref|XP_003539350.1| PREDICTED: zinc transporter 6, chloroplastic...   181   4e-44
ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222...   181   5e-44
ref|XP_004166326.1| PREDICTED: zinc transporter 6, chloroplastic...   176   1e-42
ref|XP_004143165.1| PREDICTED: zinc transporter 6, chloroplastic...   172   2e-41

>ref|XP_002276231.1| PREDICTED: zinc transporter 6, chloroplastic [Vitis vinifera]
           gi|297745865|emb|CBI15921.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/128 (70%), Positives = 107/128 (83%)
 Frame = -2

Query: 386 CRNSQAATHLKLISILVIFITSVIGISSPVMLARKFQGKPTFEKVTLVIKCFAAGVILAT 207
           CR+ +AA HLKL+SI VIFITSV+GISSPVMLAR FQGKP ++K  L+IKCFAAGVIL+T
Sbjct: 14  CRDGRAAAHLKLVSIFVIFITSVVGISSPVMLARVFQGKPMYDKAILIIKCFAAGVILST 73

Query: 206 SFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVTATSHVEHKKTSHY 27
           S VHVLPDAF ALSDC VAS HPWKDFPF+GL +M+G     LVD+TA++HV+  K SHY
Sbjct: 74  SLVHVLPDAFAALSDCHVASHHPWKDFPFSGLVTMIGAILALLVDLTASAHVDSHKPSHY 133

Query: 26  TPVGTLDE 3
           TP+GT +E
Sbjct: 134 TPIGTQEE 141


>ref|XP_003539350.1| PREDICTED: zinc transporter 6, chloroplastic-like [Glycine max]
          Length = 394

 Score =  181 bits (460), Expect = 4e-44
 Identities = 91/137 (66%), Positives = 108/137 (78%)
 Frame = -2

Query: 413 VTNLTQESTCRNSQAATHLKLISILVIFITSVIGISSPVMLARKFQGKPTFEKVTLVIKC 234
           VT+L Q + CRNS AATHLK+ISI  IF+TSV+G+S+PVMLAR FQGK  ++   L+IKC
Sbjct: 73  VTDLAQAAACRNSAAATHLKVISICTIFVTSVMGVSTPVMLARYFQGKSLYDIAILLIKC 132

Query: 233 FAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVTATSH 54
           FAAGVILATS VHVLPDAF ALSDCQVAS HPWKDFPF GL +++G     LVD  A+SH
Sbjct: 133 FAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLIGVLMALLVDTVASSH 192

Query: 53  VEHKKTSHYTPVGTLDE 3
           +EH    HYTPV TL++
Sbjct: 193 MEH---GHYTPVETLEK 206


>ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222849652|gb|EEE87199.1|
           ZIP transporter [Populus trichocarpa]
          Length = 335

 Score =  181 bits (459), Expect = 5e-44
 Identities = 91/141 (64%), Positives = 109/141 (77%), Gaps = 8/141 (5%)
 Frame = -2

Query: 401 TQESTCRNSQAATHLKLISILVIFITSVIGISSPVMLARKFQGKPTFEKVTLVIKCFAAG 222
           T+ +TCR++QAATHLKLISIL+IF TS+IGIS PV+LAR FQGKP ++K TL+IKCFAAG
Sbjct: 10  TRSTTCRDTQAATHLKLISILIIFFTSIIGISFPVLLARYFQGKPVYDKATLIIKCFAAG 69

Query: 221 VILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVTATSHVEHK 42
           VIL+TS VHVLPDAF ALSDC VAS HPWKDFPF GL +++G     LVD+TA++HVE  
Sbjct: 70  VILSTSLVHVLPDAFGALSDCHVASKHPWKDFPFAGLITLIGVLLALLVDLTASAHVEQH 129

Query: 41  KTSH--------YTPVGTLDE 3
              H        YT VGT +E
Sbjct: 130 GQGHGDGDGDGEYTVVGTQEE 150


>ref|XP_004166326.1| PREDICTED: zinc transporter 6, chloroplastic-like [Cucumis sativus]
          Length = 334

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/131 (65%), Positives = 102/131 (77%)
 Frame = -2

Query: 410 TNLTQESTCRNSQAATHLKLISILVIFITSVIGISSPVMLARKFQGKPTFEKVTLVIKCF 231
           T+ T +S CR+ +AA HLKLISI +IFITSVIG+SSPV+L R F GKP ++K  L +KCF
Sbjct: 7   TDFTHDSACRDGRAAAHLKLISIFLIFITSVIGVSSPVLLTRFFHGKPLYDKAILTVKCF 66

Query: 230 AAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVTATSHV 51
           AAGVIL+TS VHVLPDAFDALSDC++AS HPW+DFPF+GL +MVG      VDVTATSHV
Sbjct: 67  AAGVILSTSLVHVLPDAFDALSDCRIASQHPWRDFPFSGLVTMVGALVALFVDVTATSHV 126

Query: 50  EHKKTSHYTPV 18
            H     Y PV
Sbjct: 127 GH---DQYNPV 134


>ref|XP_004143165.1| PREDICTED: zinc transporter 6, chloroplastic-like [Cucumis sativus]
          Length = 334

 Score =  172 bits (437), Expect = 2e-41
 Identities = 85/131 (64%), Positives = 101/131 (77%)
 Frame = -2

Query: 410 TNLTQESTCRNSQAATHLKLISILVIFITSVIGISSPVMLARKFQGKPTFEKVTLVIKCF 231
           T+ T +S CR+ +AA HLKLISI +IFITSVIG+SSPV+L R F GKP ++K  L +K F
Sbjct: 7   TDFTHDSACRDGRAAAHLKLISIFLIFITSVIGVSSPVLLTRFFHGKPLYDKAILTVKSF 66

Query: 230 AAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVTATSHV 51
           AAGVIL+TS VHVLPDAFDALSDC++AS HPW+DFPF+GL +MVG      VDVTATSHV
Sbjct: 67  AAGVILSTSLVHVLPDAFDALSDCRIASQHPWRDFPFSGLVTMVGALVALFVDVTATSHV 126

Query: 50  EHKKTSHYTPV 18
            H     Y PV
Sbjct: 127 GH---DQYNPV 134


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