BLASTX nr result

ID: Coptis23_contig00029200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029200
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263300.2| PREDICTED: uncharacterized protein LOC100259...   181   7e-44
ref|XP_002300315.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
ref|XP_002518329.1| conserved hypothetical protein [Ricinus comm...   171   6e-41
ref|XP_004137075.1| PREDICTED: uncharacterized protein LOC101209...   151   5e-35
ref|XP_003528402.1| PREDICTED: uncharacterized protein LOC100819...   149   2e-34

>ref|XP_002263300.2| PREDICTED: uncharacterized protein LOC100259417 [Vitis vinifera]
           gi|296088077|emb|CBI35436.3| unnamed protein product
           [Vitis vinifera]
          Length = 367

 Score =  181 bits (458), Expect = 7e-44
 Identities = 90/156 (57%), Positives = 118/156 (75%), Gaps = 4/156 (2%)
 Frame = +3

Query: 48  IYQKCRFSFSHSFQKSRNFRSKSALEALTISSEE---NIILYNYPSFSGAFSALSAHLYH 218
           + +KC    +    ++R+FRS +ALEA+  +SEE   NI LYNYPSFSGAFSAL AHL+H
Sbjct: 7   LLRKCGGICATPSLRARSFRSNAALEAIAKASEERIPNIALYNYPSFSGAFSALFAHLFH 66

Query: 219 THLNIPHLILPFSFVEPFKIHDFNLNALKTCYLLDFIGPKRFAIELAQLVN-QVLVFDHR 395
           +HLN P LILPFS VEP ++ D N+  +  CY LDF+GPK FA++L+Q    QV+ FDHR
Sbjct: 67  SHLNFPCLILPFSSVEPLRVEDLNVEGINKCYFLDFLGPKGFAVDLSQKSPCQVIGFDHR 126

Query: 396 KSSLSKIPSYQDCPENVTFNVDVEKSSTTAVYDYFS 503
           KSS+SKIPS +DCPEN+ F+ D+E+SS+ AVY+YFS
Sbjct: 127 KSSVSKIPSPEDCPENLKFHFDLERSSSNAVYEYFS 162


>ref|XP_002300315.1| predicted protein [Populus trichocarpa] gi|222847573|gb|EEE85120.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  173 bits (438), Expect = 1e-41
 Identities = 86/141 (60%), Positives = 112/141 (79%), Gaps = 4/141 (2%)
 Frame = +3

Query: 93  SRNFRSKSALEALTISSEENI---ILYNYPSFSGAFSALSAHLYHTHLNIPHLILPFSFV 263
           +R FRS +ALEA++ ++EE     +LYNYPSFSGAFSAL AHL+H+ LN+P LILPFS V
Sbjct: 26  AREFRSDAALEAISKANEEKTPIAVLYNYPSFSGAFSALFAHLFHSRLNLPCLILPFSSV 85

Query: 264 EPFKIHDFNLNALKTCYLLDFIGPKRFAIELAQLVN-QVLVFDHRKSSLSKIPSYQDCPE 440
           EPF++ DF +  L+ CYLLDFIGP+ FA  L++  N QV+ FDHRKS LS++ S +DC E
Sbjct: 86  EPFRVEDFRIEGLERCYLLDFIGPRGFASTLSRQSNCQVICFDHRKSVLSRVQSKEDCGE 145

Query: 441 NVTFNVDVEKSSTTAVYDYFS 503
            V+F+VDVEKSS+T+VY+YFS
Sbjct: 146 KVSFSVDVEKSSSTSVYEYFS 166


>ref|XP_002518329.1| conserved hypothetical protein [Ricinus communis]
           gi|223542549|gb|EEF44089.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 369

 Score =  171 bits (433), Expect = 6e-41
 Identities = 86/143 (60%), Positives = 108/143 (75%), Gaps = 5/143 (3%)
 Frame = +3

Query: 90  KSRNFRSKSALEALTISSEEN----IILYNYPSFSGAFSALSAHLYHTHLNIPHLILPFS 257
           K   FRSKSALEA+  + EE     ++LYNYPSFSGAFSAL AHL+H++ N+PHLILPFS
Sbjct: 24  KVNGFRSKSALEAIAKAREEEKIQTLVLYNYPSFSGAFSALFAHLFHSNFNLPHLILPFS 83

Query: 258 FVEPFKIHDFNLNALKTCYLLDFIGPKRFAIELA-QLVNQVLVFDHRKSSLSKIPSYQDC 434
            V PF + DF    L+ CYL DF+GP  FA  L+ + + QVL FDHRKS LS+I S ++C
Sbjct: 84  SVHPFSVQDFCFEGLERCYLFDFLGPPGFASMLSKKTMCQVLGFDHRKSLLSRISSIEEC 143

Query: 435 PENVTFNVDVEKSSTTAVYDYFS 503
           PENVTF+VDVEKSS++ VY+Y+S
Sbjct: 144 PENVTFHVDVEKSSSSVVYEYYS 166


>ref|XP_004137075.1| PREDICTED: uncharacterized protein LOC101209755 [Cucumis sativus]
           gi|449511267|ref|XP_004163910.1| PREDICTED:
           uncharacterized protein LOC101231614 [Cucumis sativus]
          Length = 365

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/140 (53%), Positives = 103/140 (73%), Gaps = 4/140 (2%)
 Frame = +3

Query: 96  RNFRSKSALEALTISSEE---NIILYNYPSFSGAFSALSAHLYHTHLNIPHLILPFSFVE 266
           R FRS +ALEA+  ++++   N++LYNYPSFSGAFSAL AHLYHT L +P LILPFS V 
Sbjct: 23  RTFRSDAALEAIARAAQDRVPNLVLYNYPSFSGAFSALFAHLYHTRLRLPSLILPFSSVA 82

Query: 267 PFKIHDFNLNALKTCYLLDFIGPKRFAIELAQLVN-QVLVFDHRKSSLSKIPSYQDCPEN 443
           P ++ D  ++ L+ CY LDF+G K FA  +++    +VL FDHRKSSL  I   +D P+N
Sbjct: 83  PLRVEDLYVDGLERCYFLDFLGSKGFAAAISRRPTCEVLCFDHRKSSLPHITPMEDRPKN 142

Query: 444 VTFNVDVEKSSTTAVYDYFS 503
           ++  +++EKSS+TAVY+YFS
Sbjct: 143 LSIRINLEKSSSTAVYEYFS 162


>ref|XP_003528402.1| PREDICTED: uncharacterized protein LOC100819357 [Glycine max]
          Length = 471

 Score =  149 bits (376), Expect = 2e-34
 Identities = 80/144 (55%), Positives = 104/144 (72%), Gaps = 7/144 (4%)
 Frame = +3

Query: 93  SRNFRSKSALEALTISSEE---NIILYNYPSFSGAFSALSAHLYHTHLNIPHLILPFSFV 263
           SR+ RS +ALEA+  +SE+   NIILYNYPSFSGAFSAL AHL+HT  N+P LILPFS V
Sbjct: 126 SRSLRSDAALEAIAKASEDRVSNIILYNYPSFSGAFSALFAHLFHTRHNLPSLILPFSAV 185

Query: 264 EPF---KIHDFNLNALKTCYLLDFIGPKRFAIELAQLVN-QVLVFDHRKSSLSKIPSYQD 431
            PF   ++ D     L+TCYLLDFI PK F  +L++    +++ FDHRK  L  IP   D
Sbjct: 186 -PFLALRVEDLCFEGLETCYLLDFIPPKEFLSDLSRKSKCKIIGFDHRKLVLRHIPPAND 244

Query: 432 CPENVTFNVDVEKSSTTAVYDYFS 503
           CP+N+  NV++EKSS++AVY+YF+
Sbjct: 245 CPDNIMINVNLEKSSSSAVYEYFA 268


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