BLASTX nr result

ID: Coptis23_contig00029196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029196
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635604.1| PREDICTED: uncharacterized protein LOC100852...   136   2e-30
emb|CAN78763.1| hypothetical protein VITISV_003315 [Vitis vinifera]   136   2e-30
ref|XP_002268753.2| PREDICTED: uncharacterized protein LOC100261...   136   2e-30
emb|CAN61422.1| hypothetical protein VITISV_030754 [Vitis vinifera]   124   1e-26
gb|ABA97336.1| transposon protein, putative, CACTA, En/Spm sub-c...   119   3e-25

>ref|XP_003635604.1| PREDICTED: uncharacterized protein LOC100852669, partial [Vitis
           vinifera]
          Length = 886

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/112 (55%), Positives = 84/112 (75%)
 Frame = +1

Query: 16  LDKRQERHFAEWFKKRMQVMRREKSSEASDELYSLACGPDRRVTRYSGCIVNGVRFHTKD 195
           L +RQ++ F +WF   M+++R + S EA+DELYSLA GPDRRV+ Y  C+VNG+RFHTKD
Sbjct: 627 LFQRQKQLFPKWFANHMKILRHQGSPEATDELYSLASGPDRRVSLYHSCVVNGIRFHTKD 686

Query: 196 REATLRTQNSGVVVNGEHQSKEMDIYGVLTDVLELNYLFGNRVFLFKCDW*D 351
           R+    TQNSGV+V G+H    +D YGVL +V+ L+Y+F N+V LFKC+W D
Sbjct: 687 RDDRHTTQNSGVLVLGDHYEDMIDFYGVLLNVVVLDYIFNNQVVLFKCEWFD 738


>emb|CAN78763.1| hypothetical protein VITISV_003315 [Vitis vinifera]
          Length = 1226

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/112 (55%), Positives = 84/112 (75%)
 Frame = +1

Query: 16   LDKRQERHFAEWFKKRMQVMRREKSSEASDELYSLACGPDRRVTRYSGCIVNGVRFHTKD 195
            L +RQ++ F +WF   M+++R + S EA+DELYSLA GPDRRV+ Y  C+VNG+RFHTKD
Sbjct: 680  LFQRQKQLFPKWFANHMKILRHQGSPEATDELYSLASGPDRRVSLYHSCVVNGIRFHTKD 739

Query: 196  REATLRTQNSGVVVNGEHQSKEMDIYGVLTDVLELNYLFGNRVFLFKCDW*D 351
            R+    TQNSGV+V G+H    +D YGVL +V+ L+Y+F N+V LFKC+W D
Sbjct: 740  RDDRHXTQNSGVLVLGDHYEDMIDFYGVLLNVVVLDYIFNNQVVLFKCEWFD 791


>ref|XP_002268753.2| PREDICTED: uncharacterized protein LOC100261419 [Vitis vinifera]
          Length = 1410

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/117 (52%), Positives = 86/117 (73%)
 Frame = +1

Query: 1    QSPHELDKRQERHFAEWFKKRMQVMRREKSSEASDELYSLACGPDRRVTRYSGCIVNGVR 180
            ++   L +RQ++ F +WF   M+++R + S EA+DELYSLA GPDRRV+ Y  C+VNG+R
Sbjct: 833  ETDDNLFQRQKQLFPKWFANHMKILRHQGSPEATDELYSLASGPDRRVSLYHSCVVNGIR 892

Query: 181  FHTKDREATLRTQNSGVVVNGEHQSKEMDIYGVLTDVLELNYLFGNRVFLFKCDW*D 351
            FHTKDR+    TQNSGV+V G+H    +D YGVL +V+ L+Y+F N+V LFKC+W D
Sbjct: 893  FHTKDRDDRHITQNSGVLVLGDHYEDMIDFYGVLLNVVVLDYIFNNQVVLFKCEWFD 949


>emb|CAN61422.1| hypothetical protein VITISV_030754 [Vitis vinifera]
          Length = 539

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/96 (58%), Positives = 74/96 (77%)
 Frame = +1

Query: 64  MQVMRREKSSEASDELYSLACGPDRRVTRYSGCIVNGVRFHTKDREATLRTQNSGVVVNG 243
           M+++R + S EA+DELYSLA GPDRRV+ Y  C+VNG+RFHTKDR+    TQNSGV+V G
Sbjct: 68  MKILRHQGSPEATDELYSLASGPDRRVSLYHSCVVNGIRFHTKDRDDRHTTQNSGVLVLG 127

Query: 244 EHQSKEMDIYGVLTDVLELNYLFGNRVFLFKCDW*D 351
           +H    +D YGVL +V+ L+Y+F N+V LFKC+W D
Sbjct: 128 DHYEDMIDFYGVLLNVVVLDYIFNNQVVLFKCEWFD 163


>gb|ABA97336.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 1118

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/119 (46%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
 Frame = +1

Query: 1    QSPHELDKRQERHFAEWFKKRMQVMRREKSSEASDELYSLACGPDRRVTRYSGCIVNGVR 180
            +  H++D+R E+ FA WFK  ++ +R+E     S+ L++L+CGPD RV   + CIVNGVR
Sbjct: 840  EDAHDVDRRLEKGFARWFKTHIRKLRKENPGVVSEALFALSCGPDLRVKSCASCIVNGVR 899

Query: 181  FHTKDREATLRTQNSGVVVNGEHQSKEMDIYGVLTDVLELNYL----FGNRVFLFKCDW 345
            + T DRE  L+TQNSGV+V+G H+   ++ YGVL ++LEL Y         V LF+CDW
Sbjct: 900  YSTVDREKYLQTQNSGVMVDGTHEGDNIEFYGVLREILELQYNSDLDIYRSVVLFRCDW 958


Top