BLASTX nr result

ID: Coptis23_contig00029190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029190
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40352.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002302582.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-36
ref|XP_001758257.1| predicted protein [Physcomitrella patens sub...    99   3e-19
ref|XP_001774631.1| predicted protein [Physcomitrella patens sub...    90   2e-16
ref|XP_001771297.1| predicted protein [Physcomitrella patens sub...    89   5e-16

>emb|CBI40352.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/107 (72%), Positives = 92/107 (85%), Gaps = 2/107 (1%)
 Frame = -2

Query: 356 FRYLAPEVYRREAYGKSVDVFSFAMIVHEMFQGRPSNMAESAEKVADRRAYEDTRPSLSS 177
           +RY+APEVYRRE+YGKS+DVFSFA+IVHEMFQG PSN AE+AE VAD+RAYED+RP LSS
Sbjct: 472 YRYMAPEVYRRESYGKSIDVFSFALIVHEMFQGGPSNRAENAEYVADKRAYEDSRPPLSS 531

Query: 176 FIFPEEIKILLRRSWHKNPESRPSFEEIITELEILQDSLDIK--ACC 42
           F++PE IK LLR  WHKNPESRP+FE II ELE +Q+S+  K  ACC
Sbjct: 532 FVYPEPIKTLLRNCWHKNPESRPTFEAIILELEKIQESMISKKTACC 578



 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/103 (66%), Positives = 83/103 (80%), Gaps = 1/103 (0%)
 Frame = -2

Query: 347 LAPEVYRREAYGKSVDVFSFAMIVHEMFQGRPSNMAESAEKVADRRAYEDTRPSLSSFIF 168
           +APEVYRRE+YGKS+DVFSFA+IVHEMF G+ S  AE+ E VAD++AYED+RP LSS+++
Sbjct: 1   MAPEVYRRESYGKSIDVFSFAVIVHEMFHGKTSKRAENPEYVADKQAYEDSRPPLSSYVY 60

Query: 167 PEEIKILLRRSWHKNPESRPSFEEIITELEILQDS-LDIKACC 42
           P  IK LLR  WHKNPE RP+FE II ELE +Q S LD KA C
Sbjct: 61  PRPIKTLLRNCWHKNPEVRPTFEAIILELEEIQVSMLDKKAAC 103


>ref|XP_002302582.1| predicted protein [Populus trichocarpa] gi|222844308|gb|EEE81855.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  154 bits (390), Expect = 5e-36
 Identities = 72/109 (66%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
 Frame = -2

Query: 356 FRYLAPEVYRREAYGKSVDVFSFAMIVHEMFQGRPSNMAESAEKVADRRAYEDTRPSLSS 177
           +RY+APEVYRRE+YGKSVDVFSFA+IVHE+FQG PSN     E +AD+RA+ED RPSLSS
Sbjct: 55  YRYMAPEVYRRESYGKSVDVFSFALIVHEIFQGGPSNRTALPEHIADKRAFEDARPSLSS 114

Query: 176 FIFPEEIKILLRRSWHKNPESRPSFEEIITELEILQDSL----DIKACC 42
           F++P+ IK+LLR  WHKNPESRP+FEEII++LE +Q+S     D   CC
Sbjct: 115 FVYPDPIKMLLRECWHKNPESRPTFEEIISKLESIQESFQSKKDAGGCC 163


>ref|XP_001758257.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162690713|gb|EDQ77079.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 380

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/93 (50%), Positives = 64/93 (68%)
 Frame = -2

Query: 356 FRYLAPEVYRREAYGKSVDVFSFAMIVHEMFQGRPSNMAESAEKVADRRAYEDTRPSLSS 177
           +RY+APEV+  +AY KSVDVFSFA+IVHE+F+G P +  + A+ +A  RA E  RPS   
Sbjct: 286 YRYMAPEVFLHKAYDKSVDVFSFAIIVHELFEGGPHSKFQGAKDIAHFRAKEGKRPSFVV 345

Query: 176 FIFPEEIKILLRRSWHKNPESRPSFEEIITELE 78
             +P  +K LL++ WH++P  RPSF  II  LE
Sbjct: 346 NTYPSRMKDLLKQCWHQDPTKRPSFATIIVHLE 378


>ref|XP_001774631.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162674051|gb|EDQ60565.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 234

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/96 (43%), Positives = 63/96 (65%)
 Frame = -2

Query: 350 YLAPEVYRREAYGKSVDVFSFAMIVHEMFQGRPSNMAESAEKVADRRAYEDTRPSLSSFI 171
           Y+APEVYR E + KS+D F+F++I++EM++G   NM  + E VA RRA +  RPS  +  
Sbjct: 125 YMAPEVYRNEPFDKSIDTFAFSLIIYEMYEGL-QNMDGNPEAVARRRAIDHERPSFRATS 183

Query: 170 FPEEIKILLRRSWHKNPESRPSFEEIITELEILQDS 63
           +P  ++ L+   WHK P  RP F E+I +LE ++ S
Sbjct: 184 YPTGMRELIAACWHKEPAKRPPFSEVIRQLEDMKSS 219


>ref|XP_001771297.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162677386|gb|EDQ63857.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 425

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/94 (45%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = -2

Query: 356 FRYLAPEVYRREAYGKSVDVFSFAMIVHEMF-QGRPSNMAESAEKVADRRAYEDTRPSLS 180
           +RY+APEV+  +AY KSVDVFSFA+IVHE+  +  P +  + ++ +A  RA E  RP+ S
Sbjct: 284 YRYMAPEVFLHKAYDKSVDVFSFAVIVHEVIVRSGPYSKFQGSKDIAHFRAKEGKRPTFS 343

Query: 179 SFIFPEEIKILLRRSWHKNPESRPSFEEIITELE 78
           +  +P ++K LL   WH++P  RPSF  +I  LE
Sbjct: 344 ANTYPPKMKDLLNECWHQDPTKRPSFSTLIVHLE 377


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