BLASTX nr result

ID: Coptis23_contig00029188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029188
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003580159.1| PREDICTED: oxygen-evolving enhancer protein ...    94   1e-17
ref|XP_002446802.1| hypothetical protein SORBIDRAFT_06g022890 [S...    92   4e-17
ref|NP_001144977.1| hypothetical protein [Zea mays] gi|195649363...    88   6e-16
ref|XP_003575415.1| PREDICTED: oxygen-evolving enhancer protein ...    88   8e-16
ref|NP_001053342.1| Os04g0522800 [Oryza sativa Japonica Group] g...    88   8e-16

>ref|XP_003580159.1| PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic-like
           [Brachypodium distachyon]
          Length = 118

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/106 (42%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
 Frame = -1

Query: 311 IESRGSASRIRKCASEFLSIKD--LMDEEDSWELMGKDLCLKSTFLFCDIKQVISHASED 138
           IE +G   RI+ CA+E  S+++  ++D+E+SW L+G+DL LK+TFL+ D+ +VIS    D
Sbjct: 5   IELKGCVCRIKNCATELFSMEEDLMIDDEESWNLVGRDLRLKATFLYIDLSRVISSCGSD 64

Query: 137 K-KKSLTELANQLFYYIQELDHVIKLQNIPLTRSRFNDAALVLQEV 3
           + KK+LT LAN+  Y++ EL+  +K +++PL +  ++D   VL+EV
Sbjct: 65  ECKKTLTRLANKFLYFMDELEDAVKSRSVPLMQMCYSDTTHVLREV 110


>ref|XP_002446802.1| hypothetical protein SORBIDRAFT_06g022890 [Sorghum bicolor]
           gi|241937985|gb|EES11130.1| hypothetical protein
           SORBIDRAFT_06g022890 [Sorghum bicolor]
          Length = 129

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/108 (44%), Positives = 76/108 (70%), Gaps = 4/108 (3%)
 Frame = -1

Query: 314 DIESRGSASRIRKCASEFLSI--KDL-MDEEDSWELMGKDLCLKSTFLFCDIKQVISHA- 147
           ++E +G   RI+ CA E  S   +DL +D+EDSW+L+G+DL LK+TFL+ D+ +VI+   
Sbjct: 4   EMEQKGCLCRIKNCAIELFSAMEEDLEVDDEDSWDLVGRDLRLKATFLYIDLSRVITFCE 63

Query: 146 SEDKKKSLTELANQLFYYIQELDHVIKLQNIPLTRSRFNDAALVLQEV 3
            E+ KK+LT LAN+ FY + EL   ++ +++PLT+ R++D A  L+EV
Sbjct: 64  GEEHKKALTVLANKFFYSMDELSDAVESRSLPLTQVRYSDTADALREV 111


>ref|NP_001144977.1| hypothetical protein [Zea mays] gi|195649363|gb|ACG44149.1|
           hypothetical protein [Zea mays]
           gi|413918949|gb|AFW58881.1| hypothetical protein
           ZEAMMB73_602353 [Zea mays]
          Length = 121

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/107 (41%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
 Frame = -1

Query: 314 DIESRGSASRIRKCASEFLSIKDLM--DEEDSWELMGKDLCLKSTFLFCDIKQVISHAS- 144
           ++E +G   RI+ CA E LS+++ +  D+E+SW+L+G+DL LK+TFL  D+ ++I+    
Sbjct: 7   EMEQKGCLCRIKNCAIELLSMEEDLETDDEESWDLVGRDLRLKATFLCIDLSRLIAFCQG 66

Query: 143 EDKKKSLTELANQLFYYIQELDHVIKLQNIPLTRSRFNDAALVLQEV 3
           E+ KK+LT +AN+ FY + EL   ++ +++PLT+ R+ D A  L+EV
Sbjct: 67  EEHKKALTVVANKFFYSMDELGDAVESRSLPLTQVRYGDTADALREV 113


>ref|XP_003575415.1| PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic-like
           [Brachypodium distachyon]
          Length = 119

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 47/107 (43%), Positives = 72/107 (67%), Gaps = 4/107 (3%)
 Frame = -1

Query: 311 IESRGSASRIRKCASEFLSIK-DLMDE--EDSWELMGKDLCLKSTFLFCDIKQVISHASE 141
           IE +G   RI+ CA + LS++ DL+ +  +DSW+L+ +DL LK+TFL+ D+ +VIS +  
Sbjct: 5   IEMKGCVCRIKNCAGQLLSMEEDLVTDLDDDSWDLVWRDLRLKATFLYIDLSRVISRSEN 64

Query: 140 D-KKKSLTELANQLFYYIQELDHVIKLQNIPLTRSRFNDAALVLQEV 3
           D ++K+LT LAN+ FY   EL   +  +++PL R  FND A  L+EV
Sbjct: 65  DERRKALTLLANKFFYSTDELGDAVTSRSVPLVRMCFNDTAQALREV 111


>ref|NP_001053342.1| Os04g0522800 [Oryza sativa Japonica Group]
           gi|113564913|dbj|BAF15256.1| Os04g0522800 [Oryza sativa
           Japonica Group] gi|215686993|dbj|BAG90863.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222629228|gb|EEE61360.1| hypothetical protein
           OsJ_15503 [Oryza sativa Japonica Group]
          Length = 118

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/106 (42%), Positives = 72/106 (67%), Gaps = 3/106 (2%)
 Frame = -1

Query: 311 IESRGSASRIRKCASEFLSIKD--LMDEEDSWELMGKDLCLKSTFLFCDIKQVISHASED 138
           IE +G   RI  CA E  S+++  ++D+EDSW+L+ +DL LK+TFL+ D+ +VI     D
Sbjct: 5   IELKGCICRINNCAVELFSMEEDLVIDDEDSWDLLARDLRLKATFLYIDLGRVICSCEID 64

Query: 137 K-KKSLTELANQLFYYIQELDHVIKLQNIPLTRSRFNDAALVLQEV 3
           + KK LT LAN+ FY++ EL + +  ++IPL +  ++D  L+L+EV
Sbjct: 65  EHKKMLTGLANKFFYFMDELTNAVSSRSIPLMQVCYSDTTLLLREV 110


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