BLASTX nr result

ID: Coptis23_contig00029187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029187
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302371.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
emb|CBI19277.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   124   6e-27
ref|XP_002514051.1| Protein VERNALIZATION-INSENSITIVE, putative ...   123   2e-26
gb|ABA98812.1| Fibronectin type III domain containing protein, e...   117   1e-24

>ref|XP_002302371.1| predicted protein [Populus trichocarpa] gi|222844097|gb|EEE81644.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  130 bits (328), Expect = 9e-29
 Identities = 58/84 (69%), Positives = 72/84 (85%)
 Frame = +2

Query: 2   EYCVRVIRWLEREGHMEKDFRVKFLTWFSLKSTIRDRRVVSAFVDTLIDDPSSLADQLVD 181
           EY VRV++WLE  GH+ +DFRVKFLTWFSLK+T++DRRVV+ FVD LIDDP SLA+QL+D
Sbjct: 442 EYSVRVVKWLELRGHIAEDFRVKFLTWFSLKATLQDRRVVNVFVDALIDDPRSLAEQLID 501

Query: 182 TFMDEIRKEKKVIPRFGFCTQLWH 253
           TFMD+I  +KK +P  GFCT+LWH
Sbjct: 502 TFMDKICCDKKPVPWHGFCTKLWH 525


>emb|CBI19277.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/84 (66%), Positives = 71/84 (84%)
 Frame = +2

Query: 2   EYCVRVIRWLEREGHMEKDFRVKFLTWFSLKSTIRDRRVVSAFVDTLIDDPSSLADQLVD 181
           EY VRVI+WLE +GH+ +DFRVKFLTWFSLK+T+++RRVVS FVDTLIDDP SLA+QL+ 
Sbjct: 279 EYSVRVIKWLECQGHIAEDFRVKFLTWFSLKATMQERRVVSVFVDTLIDDPPSLAEQLIH 338

Query: 182 TFMDEIRKEKKVIPRFGFCTQLWH 253
           +FMDEI  ++K + + GFC  LWH
Sbjct: 339 SFMDEICYDQKSVSKQGFCASLWH 362


>ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 617

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/84 (66%), Positives = 71/84 (84%)
 Frame = +2

Query: 2   EYCVRVIRWLEREGHMEKDFRVKFLTWFSLKSTIRDRRVVSAFVDTLIDDPSSLADQLVD 181
           EY VRVI+WLE +GH+ +DFRVKFLTWFSLK+T+++RRVVS FVDTLIDDP SLA+QL+ 
Sbjct: 534 EYSVRVIKWLECQGHIAEDFRVKFLTWFSLKATMQERRVVSVFVDTLIDDPPSLAEQLIH 593

Query: 182 TFMDEIRKEKKVIPRFGFCTQLWH 253
           +FMDEI  ++K + + GFC  LWH
Sbjct: 594 SFMDEICYDQKSVSKQGFCASLWH 617


>ref|XP_002514051.1| Protein VERNALIZATION-INSENSITIVE, putative [Ricinus communis]
           gi|223547137|gb|EEF48634.1| Protein
           VERNALIZATION-INSENSITIVE, putative [Ricinus communis]
          Length = 632

 Score =  123 bits (308), Expect = 2e-26
 Identities = 54/84 (64%), Positives = 69/84 (82%)
 Frame = +2

Query: 2   EYCVRVIRWLEREGHMEKDFRVKFLTWFSLKSTIRDRRVVSAFVDTLIDDPSSLADQLVD 181
           EY VRV++WLE +GH+ +DFRVKFLTWFSLK+T+++RRVV+ FV+ LIDDP SLA QL+ 
Sbjct: 549 EYSVRVVKWLESKGHIVEDFRVKFLTWFSLKATMQERRVVNVFVEALIDDPPSLAGQLIH 608

Query: 182 TFMDEIRKEKKVIPRFGFCTQLWH 253
           +F DEI  E+K  P  GFCT+LWH
Sbjct: 609 SFTDEICSERKTTPEHGFCTRLWH 632


>gb|ABA98812.1| Fibronectin type III domain containing protein, expressed [Oryza
           sativa Japonica Group] gi|215697015|dbj|BAG91009.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218186988|gb|EEC69415.1| hypothetical protein
           OsI_38576 [Oryza sativa Indica Group]
          Length = 707

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/84 (67%), Positives = 69/84 (82%)
 Frame = +2

Query: 2   EYCVRVIRWLEREGHMEKDFRVKFLTWFSLKSTIRDRRVVSAFVDTLIDDPSSLADQLVD 181
           EYCV+VIRWLE  GH+EKDFR+KFLTWFSL+ST ++RRVV  F+ TL DDPSSLA QL+D
Sbjct: 627 EYCVKVIRWLECSGHIEKDFRMKFLTWFSLRSTEQERRVVITFIRTLADDPSSLAGQLLD 686

Query: 182 TFMDEIRKEKKVIPRFGFCTQLWH 253
           +F +EI   KK  PR GFC++LWH
Sbjct: 687 SF-EEIVSSKK--PRTGFCSKLWH 707


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