BLASTX nr result
ID: Coptis23_contig00029172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00029172
(525 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512762.1| kinase, putative [Ricinus communis] gi|22354... 57 1e-07
ref|XP_003553447.1| PREDICTED: probable LRR receptor-like serine... 56 1e-07
ref|NP_182322.1| putative LRR receptor-like serine/threonine-pro... 57 1e-07
ref|XP_002880339.1| hypothetical protein ARALYDRAFT_904279 [Arab... 57 1e-07
emb|CAD40762.2| OSJNBa0081G05.15 [Oryza sativa Japonica Group] g... 57 2e-07
>ref|XP_002512762.1| kinase, putative [Ricinus communis] gi|223547773|gb|EEF49265.1|
kinase, putative [Ricinus communis]
Length = 631
Score = 57.0 bits (136), Expect(2) = 1e-07
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = -1
Query: 465 YSCKLCDFGIAGLVPSGQTHGITGPDGTKAYMYGLLLQEANFDDVTFR*LNDVYSYGVVL 286
Y KL DFGI+ + S QTH TG GT YM + F + +DVYS+GVVL
Sbjct: 462 YGAKLSDFGISRSIASDQTHRTTGARGTPGYMDPEYFRTGEFTE-----RSDVYSFGVVL 516
Query: 285 TELL---------RRVQVVLVDETFRAGIQNMQLSSVLDSGLSHIGLEDVLQQAVNLAAI 133
ELL + + + E F +++ +L ++D + +++ + N+A
Sbjct: 517 VELLTGRKPTFSSESEESISLAELFNQSMRHDELFDIIDPQIMEHYVKEEVITVANVAKK 576
Query: 132 CMSMV 118
C++++
Sbjct: 577 CLNLI 581
Score = 23.9 bits (50), Expect(2) = 1e-07
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 524 AREIVVHRDLKSENIL 477
AR + HRD+KS NIL
Sbjct: 442 ARTPIYHRDIKSTNIL 457
>ref|XP_003553447.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase RKF3-like [Glycine max]
Length = 576
Score = 56.2 bits (134), Expect(2) = 1e-07
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Frame = -1
Query: 468 DYSCKLCDFGIAGLVPSGQTHGITGPDGTKAYMYGLLLQEANFDDVTFR*LNDVYSYGVV 289
++ K+ DFG+A P G TH T GTK Y + + A + +T R +DV+S+GVV
Sbjct: 416 NFEAKVADFGLAKFNPEGMTHMSTRVAGTKGY---VAPEYALYGQLTER--SDVFSFGVV 470
Query: 288 LTELLRRVQVVLVDETFRAG---------IQNMQLSSVLDSGLSHIGLEDVLQQAVNLAA 136
L ELL + + VD + ++N + V++ G+ +G +VL++ V +A
Sbjct: 471 LLELLSGKKALHVDNDGQPSALTDFAWSLVRNGKALDVIEDGMPELGPIEVLEKYVLVAV 530
Query: 135 IC 130
+C
Sbjct: 531 LC 532
Score = 24.6 bits (52), Expect(2) = 1e-07
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 524 AREIVVHRDLKSENIL 477
A+ ++HRD+KS NIL
Sbjct: 397 AQPSIIHRDIKSSNIL 412
>ref|NP_182322.1| putative LRR receptor-like serine/threonine-protein kinase RKF3
[Arabidopsis thaliana]
gi|75319082|sp|P93050.1|RKF3_ARATH RecName:
Full=Probable LRR receptor-like serine/threonine-protein
kinase RKF3; AltName: Full=Receptor-like kinase in
flowers 3; Flags: Precursor gi|1785621|emb|CAB06335.1|
AtPK2324 [Arabidopsis thaliana]
gi|2465927|gb|AAC50045.1| receptor-like serine/threonine
kinase [Arabidopsis thaliana] gi|4249408|gb|AAD13705.1|
putative protein kinase [Arabidopsis thaliana]
gi|14335116|gb|AAK59837.1| At2g48010/T9J23.16
[Arabidopsis thaliana] gi|23308235|gb|AAN18087.1|
At2g48010/T9J23.16 [Arabidopsis thaliana]
gi|330255829|gb|AEC10923.1| putative LRR receptor-like
serine/threonine-protein kinase RKF3 [Arabidopsis
thaliana]
Length = 617
Score = 57.0 bits (136), Expect(2) = 1e-07
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Frame = -1
Query: 465 YSCKLCDFGIAGLVPSGQTHGITGPDGTKAY------MYGLLLQEANFDDVTFR*LNDVY 304
+ K+ DFG+A P G TH T GT Y +YG L +++ DVY
Sbjct: 424 FEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKS-----------DVY 472
Query: 303 SYGVVLTELLRRVQVVLVDETFR---------AGIQNMQLSSVLDSGLSHIGLEDVLQQA 151
S+GVVL ELL R + ++ DE + + ++ Q V++ G+ G +VL++
Sbjct: 473 SFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKY 532
Query: 150 VNLAAIC 130
V +A +C
Sbjct: 533 VLIAVLC 539
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2
Query: 524 AREIVVHRDLKSENIL 477
A+ ++HRD+K+ NIL
Sbjct: 404 AQPSIIHRDIKASNIL 419
>ref|XP_002880339.1| hypothetical protein ARALYDRAFT_904279 [Arabidopsis lyrata subsp.
lyrata] gi|297326178|gb|EFH56598.1| hypothetical protein
ARALYDRAFT_904279 [Arabidopsis lyrata subsp. lyrata]
Length = 613
Score = 57.0 bits (136), Expect(2) = 1e-07
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Frame = -1
Query: 465 YSCKLCDFGIAGLVPSGQTHGITGPDGTKAY------MYGLLLQEANFDDVTFR*LNDVY 304
+ K+ DFG+A P G TH T GT Y +YG L +++ DVY
Sbjct: 420 FEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKS-----------DVY 468
Query: 303 SYGVVLTELLRRVQVVLVDETFR---------AGIQNMQLSSVLDSGLSHIGLEDVLQQA 151
S+GVVL ELL R + ++ DE + + ++ Q V++ G+ G +VL++
Sbjct: 469 SFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKY 528
Query: 150 VNLAAIC 130
V +A +C
Sbjct: 529 VLIAVLC 535
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -2
Query: 524 AREIVVHRDLKSENIL 477
A+ ++HRD+K+ NIL
Sbjct: 400 AQPSIIHRDIKASNIL 415
>emb|CAD40762.2| OSJNBa0081G05.15 [Oryza sativa Japonica Group]
gi|38347654|emb|CAE05044.2| OSJNBa0049H08.5 [Oryza
sativa Japonica Group] gi|116309614|emb|CAH66669.1|
OSIGBa0110B10.6 [Oryza sativa Indica Group]
Length = 676
Score = 56.6 bits (135), Expect(2) = 2e-07
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = -1
Query: 471 ADYSCKLCDFGIAGLVPSGQTHGITGPDGTKAYMYGLLLQEANFDDVTFR*LNDVYSYGV 292
A+Y+ K+ DFG++ L+P+ QTH T GT Y+ + ++ +DVYS+GV
Sbjct: 475 ANYTAKVSDFGVSRLIPNDQTHVFTNIQGTFGYLDPEYYHTGHLNE-----KSDVYSFGV 529
Query: 291 VLTELLRRVQVVLVDET-FRAGIQNMQLSSVLDSGLSHIGLEDVLQQAVNLAAICMSMVA 115
VL ELL R Q + E+ + + LS + ++ I +VL++A +++VA
Sbjct: 530 VLLELLLRKQPIFDSESGSKKNLSIYFLSELKGRPVAEIAAPEVLEEATEDE---INIVA 586
Query: 114 TIRRDLELVHPEE 76
+I R + EE
Sbjct: 587 SIARACLRLRGEE 599
Score = 23.1 bits (48), Expect(2) = 2e-07
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 512 VVHRDLKSENIL 477
V+HRD+KS NIL
Sbjct: 461 VLHRDVKSSNIL 472