BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029151
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203...   213   2e-53
emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]   205   3e-51
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   204   5e-51
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   203   1e-50
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   203   1e-50

>ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203557 [Cucumis sativus]
          Length = 1406

 Score =  213 bits (541), Expect = 2e-53
 Identities = 99/152 (65%), Positives = 120/152 (78%)
 Frame = +1

Query: 1    FGRDKTLHLLSELYFWPSQRKEVQRFVERCCICQVSIGHATNVGLYMPLPVPTKPWADIN 180
            FGRDKTL  +S  +FWP   ++V  F++RC ICQ + G++ N GLY PLP+P+  W D++
Sbjct: 1133 FGRDKTLVAISSKFFWPQLNRDVTNFIKRCSICQTAKGNSQNTGLYTPLPIPSTIWEDLS 1192

Query: 181  MDFVLGLPRT*RGADSIFVVVDRFSKMAHFIACKKTSDAIHVAQLFFREIYRLHGLPETI 360
            MDFVLGLPRT RG DS+FVVVDRFSKMAHFI CKKT DA+++A LFFREI RLHG+P+TI
Sbjct: 1193 MDFVLGLPRTQRGHDSVFVVVDRFSKMAHFIPCKKTFDALNIANLFFREIVRLHGIPKTI 1252

Query: 361  VSDRDTPFLSHFWRSL*KLVHTSLDFSSAYHP 456
            VSDRD  FLSHFWRSL K   T+L FS+A HP
Sbjct: 1253 VSDRDVKFLSHFWRSLWKKFDTNLLFSTASHP 1284


>emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]
          Length = 665

 Score =  205 bits (522), Expect = 3e-51
 Identities = 93/152 (61%), Positives = 121/152 (79%)
 Frame = +1

Query: 1   FGRDKTLHLLSELYFWPSQRKEVQRFVERCCICQVSIGHATNVGLYMPLPVPTKPWADIN 180
           FGRDKT+ +  + ++WPS +++V + V +C  CQ S G   N GLYMPLPVP +PW +++
Sbjct: 367 FGRDKTIAMTEDHFYWPSLKRDVTKNVSKCRTCQPSKGRKKNTGLYMPLPVPHEPWQELS 426

Query: 181 MDFVLGLPRT*RGADSIFVVVDRFSKMAHFIACKKTSDAIHVAQLFFREIYRLHGLPETI 360
           +DFVLGLP+T R  DSIFV+VDRFSKM HFI C KT DA+HVA+LFF+EI RLHGLP+TI
Sbjct: 427 IDFVLGLPKTFRRHDSIFVMVDRFSKMVHFIPCSKTLDAVHVAKLFFKEIVRLHGLPKTI 486

Query: 361 VSDRDTPFLSHFWRSL*KLVHTSLDFSSAYHP 456
           VSD+D  F+S+FWRSL K+++T L FSSA+HP
Sbjct: 487 VSDQDAKFMSYFWRSLWKMLNTKLKFSSAFHP 518


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/152 (65%), Positives = 112/152 (73%)
 Frame = +1

Query: 1    FGRDKTLHLLSELYFWPSQRKEVQRFVERCCICQVSIGHATNVGLYMPLPVPTKPWADIN 180
            FG  KT  +L+  +FWP  R++V RFV RC  CQ +       GLYMPLPVPT PW DI+
Sbjct: 1209 FGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDIS 1268

Query: 181  MDFVLGLPRT*RGADSIFVVVDRFSKMAHFIACKKTSDAIHVAQLFFREIYRLHGLPETI 360
            MDFVLGLPRT RG DSIFVVVDRFSKMAHFI C KT DA H+A LFFREI RLHG+P TI
Sbjct: 1269 MDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLHGVPNTI 1328

Query: 361  VSDRDTPFLSHFWRSL*KLVHTSLDFSSAYHP 456
            VSDRDT FLSHFWR+L   + T L FS+  HP
Sbjct: 1329 VSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHP 1360



 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/144 (48%), Positives = 93/144 (64%), Gaps = 1/144 (0%)
 Frame = +1

Query: 28   LSELYFWPSQRKEVQRFVERCCICQ-VSIGHATNVGLYMPLPVPTKPWADINMDFVLGLP 204
            L E Y+W S ++E+  FV  C +CQ V   H    GL  PL VP   W +I MDF+ GLP
Sbjct: 2039 LKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLP 2098

Query: 205  RT*RGADSIFVVVDRFSKMAHFIACKKTSDAIHVAQLFFREIYRLHGLPETIVSDRDTPF 384
            +T  G DSI+VVVDR +K+A FI  K T     +A+L+F  I  LHG+P+ IVSDR++ F
Sbjct: 2099 KTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGVPKKIVSDRESQF 2158

Query: 385  LSHFWRSL*KLVHTSLDFSSAYHP 456
             SHFW+ L + + T L+FS+AYHP
Sbjct: 2159 TSHFWKKLQEELGTRLNFSTAYHP 2182


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 889

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/152 (64%), Positives = 114/152 (75%)
 Frame = +1

Query: 1    FGRDKTLHLLSELYFWPSQRKEVQRFVERCCICQVSIGHATNVGLYMPLPVPTKPWADIN 180
            FG  KT  +L++ +FWP  R++V+RFV RC  CQ +       GLYMPLPVP+ PW DI+
Sbjct: 550  FGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDIS 609

Query: 181  MDFVLGLPRT*RGADSIFVVVDRFSKMAHFIACKKTSDAIHVAQLFFREIYRLHGLPETI 360
            MDFVLGLPRT +G DSIFVVVDRFSKMAHFI C K+ DA HVA LFFREI RLHG+P TI
Sbjct: 610  MDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTI 669

Query: 361  VSDRDTPFLSHFWRSL*KLVHTSLDFSSAYHP 456
            VSDRDT FLSHFWR+L   + T L FS+  HP
Sbjct: 670  VSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHP 701


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  203 bits (516), Expect = 1e-50
 Identities = 99/152 (65%), Positives = 111/152 (73%)
 Frame = +1

Query: 1    FGRDKTLHLLSELYFWPSQRKEVQRFVERCCICQVSIGHATNVGLYMPLPVPTKPWADIN 180
            FG  KT  +L+  +FWP  R++V RFV RC  CQ +       GLYMPLPVPT PW DI+
Sbjct: 1188 FGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDIS 1247

Query: 181  MDFVLGLPRT*RGADSIFVVVDRFSKMAHFIACKKTSDAIHVAQLFFREIYRLHGLPETI 360
            MDFVLGLPRT RG DSIFVVVDRFSKM HFI C KT DA H+A LFFREI RLHG+P TI
Sbjct: 1248 MDFVLGLPRTKRGRDSIFVVVDRFSKMVHFIPCHKTDDASHIADLFFREIVRLHGVPNTI 1307

Query: 361  VSDRDTPFLSHFWRSL*KLVHTSLDFSSAYHP 456
            VSDRDT FLSHFWR+L   + T L FS+  HP
Sbjct: 1308 VSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHP 1339