BLASTX nr result
ID: Coptis23_contig00029142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00029142
(239 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|2... 37 2e-07
ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251... 38 2e-07
ref|XP_002531448.1| conserved hypothetical protein [Ricinus comm... 38 2e-07
emb|CBI25573.3| unnamed protein product [Vitis vinifera] 38 2e-07
ref|XP_003609485.1| hypothetical protein MTR_4g116210 [Medicago ... 33 5e-07
>ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|222872939|gb|EEF10070.1|
predicted protein [Populus trichocarpa]
Length = 580
Score = 36.6 bits (83), Expect(3) = 2e-07
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -1
Query: 110 MHATCIVIILTYLNVCLSSQWNLYAATSLRGICYGV 3
M T +++I+TYL + LYAAT+L GICYGV
Sbjct: 421 MTCTQVMMIITYLLFASAIDGILYAATALLGICYGV 456
Score = 34.3 bits (77), Expect(3) = 2e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2
Query: 151 FVRFKTIHRTLWMTCTQ 101
FVR KTI RT+WMTCTQ
Sbjct: 409 FVRSKTIPRTIWMTCTQ 425
Score = 28.5 bits (62), Expect(3) = 2e-07
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -3
Query: 210 IYNFYNFVGRLLVGGVISEHLL 145
+++F NFVGR L GG++SEH +
Sbjct: 390 LFSFCNFVGR-LGGGIVSEHFV 410
>ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251745 [Vitis vinifera]
Length = 573
Score = 38.1 bits (87), Expect(3) = 2e-07
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -1
Query: 110 MHATCIVIILTYLNVCLSSQWNLYAATSLRGICYGV 3
M T +++++TYL + LYAAT+L GICYGV
Sbjct: 422 MTCTQVIMVITYLLFASALDGTLYAATALLGICYGV 457
Score = 33.1 bits (74), Expect(3) = 2e-07
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2
Query: 151 FVRFKTIHRTLWMTCTQ 101
F+R KTI RT+WMTCTQ
Sbjct: 410 FLRSKTIPRTIWMTCTQ 426
Score = 27.7 bits (60), Expect(3) = 2e-07
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -3
Query: 219 VVVIYNFYNFVGRLLVGGVISEHLL 145
++ +++F NF+GR L GG +SEH L
Sbjct: 388 LLCLFSFCNFLGR-LGGGAVSEHFL 411
>ref|XP_002531448.1| conserved hypothetical protein [Ricinus communis]
gi|223528941|gb|EEF30935.1| conserved hypothetical
protein [Ricinus communis]
Length = 570
Score = 38.1 bits (87), Expect(3) = 2e-07
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = -1
Query: 110 MHATCIVIILTYLNVCLSSQWNLYAATSLRGICYGV 3
M T IV+I+TYL + LYAAT+L GICYGV
Sbjct: 418 MTCTQIVMIITYLLFASAIDGILYAATALLGICYGV 453
Score = 33.1 bits (74), Expect(3) = 2e-07
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2
Query: 151 FVRFKTIHRTLWMTCTQ 101
FVR +TI RT+WMTCTQ
Sbjct: 406 FVRSRTIPRTIWMTCTQ 422
Score = 27.7 bits (60), Expect(3) = 2e-07
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 210 IYNFYNFVGRLLVGGVISEHLLGLR 136
+++F NFVGR L GG +SEH + R
Sbjct: 387 LFSFCNFVGR-LGGGTVSEHFVRSR 410
>emb|CBI25573.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 38.1 bits (87), Expect(3) = 2e-07
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -1
Query: 110 MHATCIVIILTYLNVCLSSQWNLYAATSLRGICYGV 3
M T +++++TYL + LYAAT+L GICYGV
Sbjct: 361 MTCTQVIMVITYLLFASALDGTLYAATALLGICYGV 396
Score = 33.1 bits (74), Expect(3) = 2e-07
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2
Query: 151 FVRFKTIHRTLWMTCTQ 101
F+R KTI RT+WMTCTQ
Sbjct: 349 FLRSKTIPRTIWMTCTQ 365
Score = 27.7 bits (60), Expect(3) = 2e-07
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -3
Query: 219 VVVIYNFYNFVGRLLVGGVISEHLL 145
++ +++F NF+GR L GG +SEH L
Sbjct: 327 LLCLFSFCNFLGR-LGGGAVSEHFL 350
>ref|XP_003609485.1| hypothetical protein MTR_4g116210 [Medicago truncatula]
gi|355510540|gb|AES91682.1| hypothetical protein
MTR_4g116210 [Medicago truncatula]
Length = 575
Score = 33.5 bits (75), Expect(3) = 5e-07
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2
Query: 151 FVRFKTIHRTLWMTCTQ 101
FVR KTI RT+WMTCTQ
Sbjct: 412 FVRKKTIPRTVWMTCTQ 428
Score = 32.7 bits (73), Expect(3) = 5e-07
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 110 MHATCIVIILTYLNVCLSSQWNLYAATSLRGICYGV 3
M T IV+I+ YL + + LY A + GICYGV
Sbjct: 424 MTCTQIVMIILYLLFAFAIKGTLYPAVGVLGICYGV 459
Score = 31.2 bits (69), Expect(3) = 5e-07
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = -3
Query: 210 IYNFYNFVGRLLVGGVISEHLL 145
+++F+NFVGR L GGV+SEH +
Sbjct: 393 VFSFFNFVGR-LGGGVVSEHFV 413