BLASTX nr result

ID: Coptis23_contig00029126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029126
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265070.1| PREDICTED: uncharacterized protein LOC100267...   259   1e-67
ref|XP_002312204.1| predicted protein [Populus trichocarpa] gi|1...   259   1e-67
ref|XP_002514779.1| conserved hypothetical protein [Ricinus comm...   259   2e-67
ref|XP_002315113.1| predicted protein [Populus trichocarpa] gi|2...   258   4e-67
dbj|BAJ53150.1| JHL23J11.5 [Jatropha curcas]                          258   5e-67

>ref|XP_002265070.1| PREDICTED: uncharacterized protein LOC100267455 [Vitis vinifera]
           gi|296080863|emb|CBI18793.3| unnamed protein product
           [Vitis vinifera]
          Length = 189

 Score =  259 bits (663), Expect = 1e-67
 Identities = 131/172 (76%), Positives = 148/172 (86%), Gaps = 2/172 (1%)
 Frame = -3

Query: 510 MGLSIDNGSSAINQSHHRTHKVFLLSNYILLGAASSCIFLTLSLRLFPSLCGFFLILLHV 331
           MGLSI N SS++ +SH+ THKVFL  NYILLGAASSCIFLTLSLRL PS+CGFFLILLH+
Sbjct: 1   MGLSIHNQSSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLHI 60

Query: 330 FTITGAVFGCTAASNGTNKWYASHMVFTVLTAIFQGSVSVLIFTRSGEFLGKLKSYVREE 151
            TITGAV GC AAS GT++WYA+HMV TVLTAIFQGSVSVLIFTR+ +FLG LKSYVREE
Sbjct: 61  LTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVREE 120

Query: 150 DGVMILRLAGSLCILIFCLEWVVLSLAFALRYYAYVEGD--ESSNSSRKRSA 1
           DG +IL+LAG L ILIFCLEWVV+ LAF L+YYAYVEGD   SS S+ K+SA
Sbjct: 121 DGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSA 172


>ref|XP_002312204.1| predicted protein [Populus trichocarpa] gi|118483634|gb|ABK93711.1|
           unknown [Populus trichocarpa]
           gi|222852024|gb|EEE89571.1| predicted protein [Populus
           trichocarpa]
          Length = 191

 Score =  259 bits (663), Expect = 1e-67
 Identities = 132/174 (75%), Positives = 150/174 (86%), Gaps = 4/174 (2%)
 Frame = -3

Query: 510 MGLSIDNG--SSAINQSHHRTHKVFLLSNYILLGAASSCIFLTLSLRLFPSLCGFFLILL 337
           MG SI  G  +S+++QSH+ THKVFL  NYILLGAASSCIFLTLSLRL PS+CGFFLILL
Sbjct: 1   MGASITLGGANSSVSQSHYHTHKVFLFCNYILLGAASSCIFLTLSLRLVPSVCGFFLILL 60

Query: 336 HVFTITGAVFGCTAASNGTNKWYASHMVFTVLTAIFQGSVSVLIFTRSGEFLGKLKSYVR 157
           HVFTI GAV GC AAS+GTNKWYA+HMV TVLTAIFQGSVSVLIFTR+G FLG LKSYVR
Sbjct: 61  HVFTIVGAVSGCAAASSGTNKWYAAHMVATVLTAIFQGSVSVLIFTRTGGFLGNLKSYVR 120

Query: 156 EEDGVMILRLAGSLCILIFCLEWVVLSLAFALRYYAYVEGD--ESSNSSRKRSA 1
           EEDG +IL+LAG LC++IFCLEWVVL+LAF L+YYAYVEGD  +  N + +RSA
Sbjct: 121 EEDGEVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANDGGNIATRRSA 174


>ref|XP_002514779.1| conserved hypothetical protein [Ricinus communis]
           gi|223545830|gb|EEF47333.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 190

 Score =  259 bits (661), Expect = 2e-67
 Identities = 129/172 (75%), Positives = 149/172 (86%), Gaps = 3/172 (1%)
 Frame = -3

Query: 507 GLSIDNGSSAINQSHHRTHKVFLLSNYILLGAASSCIFLTLSLRLFPSLCGFFLILLHVF 328
           G+++ N  S ++QSHH THKVFL  NYILLGAASSCIFLTLSLRL PS+CGFFLILLH+ 
Sbjct: 3   GITLGNPQS-VSQSHHHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSICGFFLILLHIL 61

Query: 327 TITGAVFGCTAASNGTNKWYASHMVFTVLTAIFQGSVSVLIFTRSGEFLGKLKSYVREED 148
           TI GAV GC AAS+GTN+WYA+HMV TVLTAIFQGSVSVLIFTR+G+FLG+LKSYVREED
Sbjct: 62  TIAGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGQLKSYVREED 121

Query: 147 GVMILRLAGSLCILIFCLEWVVLSLAFALRYYAYVEGDESS---NSSRKRSA 1
           G +IL+LAG LC++IFCLEWVVL+LAF L+YYAYVEGD SS   N   +RSA
Sbjct: 122 GEVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDVSSGGGNIGMRRSA 173


>ref|XP_002315113.1| predicted protein [Populus trichocarpa] gi|222864153|gb|EEF01284.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  258 bits (659), Expect = 4e-67
 Identities = 130/174 (74%), Positives = 151/174 (86%), Gaps = 4/174 (2%)
 Frame = -3

Query: 510 MGLSIDNGS--SAINQSHHRTHKVFLLSNYILLGAASSCIFLTLSLRLFPSLCGFFLILL 337
           MG SI  GS  S+++QSH+ TH+VFL  NYILLGAASSCIFLTLSLRL PS+CGFFLILL
Sbjct: 1   MGASITLGSTNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILL 60

Query: 336 HVFTITGAVFGCTAASNGTNKWYASHMVFTVLTAIFQGSVSVLIFTRSGEFLGKLKSYVR 157
           HVFTI GAV GC AAS+GTN+WYA+HMV TVLTAIFQGSVSVLIFTR+G+FLG LKSYVR
Sbjct: 61  HVFTIAGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVR 120

Query: 156 EEDGVMILRLAGSLCILIFCLEWVVLSLAFALRYYAYVEGDESSNS--SRKRSA 1
           EEDG +IL+LAG LC++IFCLEWVVL+LAF L+YYAYVEGD ++    + +RSA
Sbjct: 121 EEDGDVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSA 174


>dbj|BAJ53150.1| JHL23J11.5 [Jatropha curcas]
          Length = 189

 Score =  258 bits (658), Expect = 5e-67
 Identities = 129/171 (75%), Positives = 150/171 (87%), Gaps = 2/171 (1%)
 Frame = -3

Query: 507 GLSIDNGSSAINQSHHRTHKVFLLSNYILLGAASSCIFLTLSLRLFPSLCGFFLILLHVF 328
           G+++ N  S I+QSHH THKVFL  NYILLGAASSCIFLTLSLRL PS+CGFFLILLHV 
Sbjct: 3   GITLGNTHS-ISQSHHHTHKVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILLHVL 61

Query: 327 TITGAVFGCTAASNGTNKWYASHMVFTVLTAIFQGSVSVLIFTRSGEFLGKLKSYVREED 148
           TI GAV GC AAS+GTN+WYA+HMV TVLTAIFQGSVSVLIFTR+G+FLG+LKSYVREED
Sbjct: 62  TIIGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGQLKSYVREED 121

Query: 147 GVMILRLAGSLCILIFCLEWVVLSLAFALRYYAYVEGDESS--NSSRKRSA 1
           G +IL+LAG LC+L+FCLEWVVL+LAF L+YYAYVEG + S  N++ +RSA
Sbjct: 122 GEVILKLAGGLCVLVFCLEWVVLTLAFFLKYYAYVEGGDVSGGNTAMRRSA 172


Top