BLASTX nr result

ID: Coptis23_contig00029124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029124
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280055.2| PREDICTED: LRR receptor-like serine/threonin...   127   9e-28
ref|XP_002520403.1| serine-threonine protein kinase, plant-type,...   124   6e-27
ref|XP_002328588.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002881874.1| leucine-rich repeat family protein [Arabidop...   118   6e-25
ref|NP_181808.1| receptor like protein 29 [Arabidopsis thaliana]...   117   7e-25

>ref|XP_002280055.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           ERECTA-like [Vitis vinifera]
           gi|147832384|emb|CAN62290.1| hypothetical protein
           VITISV_017315 [Vitis vinifera]
          Length = 427

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/116 (57%), Positives = 71/116 (61%)
 Frame = +3

Query: 3   KLHSLQYFLMDDNPMFIPLPFXXXXXXXXXXXXXANSGYTGIIPXXXXXXXXXXXXXXXX 182
           KL SLQYF+MDDNPMFIPLP              ANSGY+G IP                
Sbjct: 252 KLQSLQYFIMDDNPMFIPLPEEFGKLMKLQELRVANSGYSGTIPTSFSHLTNLSTLSLQN 311

Query: 183 XXXXGEIPVGLSSLSHIYHLNLSRNMLNGVVPFNSGFCSRLGRNLDLSGNAGLCLN 350
               GEIP G  SLSHIYHLNLSRNML G+VPFNS F  RLGRNLDLS N GLCL+
Sbjct: 312 NRLTGEIPEGFGSLSHIYHLNLSRNMLAGIVPFNSIFLKRLGRNLDLSANPGLCLS 367


>ref|XP_002520403.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223540450|gb|EEF42019.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 457

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/115 (56%), Positives = 69/115 (60%)
 Frame = +3

Query: 6   LHSLQYFLMDDNPMFIPLPFXXXXXXXXXXXXXANSGYTGIIPXXXXXXXXXXXXXXXXX 185
           L SLQYF+MDDNPM IPLP              ANSGY+G IP                 
Sbjct: 287 LQSLQYFIMDDNPMNIPLPVDLSKLVKLQELRLANSGYSGTIPASFSLLTNLSTLSLQNN 346

Query: 186 XXXGEIPVGLSSLSHIYHLNLSRNMLNGVVPFNSGFCSRLGRNLDLSGNAGLCLN 350
              GEIP    SLSHIYHLNLSRN+L GVVPFN+ F  RLGRNLDLSGN GLCLN
Sbjct: 347 RLIGEIPPDFGSLSHIYHLNLSRNLLGGVVPFNASFLKRLGRNLDLSGNPGLCLN 401


>ref|XP_002328588.1| predicted protein [Populus trichocarpa] gi|222838570|gb|EEE76935.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/116 (52%), Positives = 70/116 (60%)
 Frame = +3

Query: 3   KLHSLQYFLMDDNPMFIPLPFXXXXXXXXXXXXXANSGYTGIIPXXXXXXXXXXXXXXXX 182
           KL SLQYF+MDDNPM+IPLP              +NS Y+G IP                
Sbjct: 263 KLQSLQYFIMDDNPMYIPLPAEFGKLVKLQELRLSNSCYSGTIPPSFSLLVNLSTLSLQN 322

Query: 183 XXXXGEIPVGLSSLSHIYHLNLSRNMLNGVVPFNSGFCSRLGRNLDLSGNAGLCLN 350
               G+IP G SSLS IYHLNLS N+L GV+PFN+ F  RLGRNLDLSGN GLCL+
Sbjct: 323 NRLTGKIPEGFSSLSRIYHLNLSGNLLGGVIPFNASFLKRLGRNLDLSGNPGLCLS 378


>ref|XP_002881874.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297327713|gb|EFH58133.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 468

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/116 (50%), Positives = 69/116 (59%)
 Frame = +3

Query: 3   KLHSLQYFLMDDNPMFIPLPFXXXXXXXXXXXXXANSGYTGIIPXXXXXXXXXXXXXXXX 182
           KL SLQYF+MD+NPMF+ LP               NSGY+G+IP                
Sbjct: 282 KLQSLQYFIMDNNPMFVALPVELGFLPKLQELQLENSGYSGVIPESYTKLMNLSSLSLAN 341

Query: 183 XXXXGEIPVGLSSLSHIYHLNLSRNMLNGVVPFNSGFCSRLGRNLDLSGNAGLCLN 350
               GEIP G  SL H++HLN SRN+L GVVPF+S F  RLG+NLDLSGN GLCLN
Sbjct: 342 NRLAGEIPSGFESLPHVFHLNFSRNLLIGVVPFDSSFLRRLGKNLDLSGNRGLCLN 397


>ref|NP_181808.1| receptor like protein 29 [Arabidopsis thaliana]
           gi|4512674|gb|AAD21728.1| hypothetical protein
           [Arabidopsis thaliana] gi|66792706|gb|AAY56455.1|
           At2g42800 [Arabidopsis thaliana]
           gi|330255076|gb|AEC10170.1| receptor like protein 29
           [Arabidopsis thaliana]
          Length = 462

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/115 (51%), Positives = 69/115 (60%)
 Frame = +3

Query: 6   LHSLQYFLMDDNPMFIPLPFXXXXXXXXXXXXXANSGYTGIIPXXXXXXXXXXXXXXXXX 185
           L SLQYF+MD+NPMF+ LP               NSGY+G+IP                 
Sbjct: 284 LQSLQYFIMDNNPMFVALPVELGFLPKLQELQLENSGYSGVIPESYTKLTNLSSLSLANN 343

Query: 186 XXXGEIPVGLSSLSHIYHLNLSRNMLNGVVPFNSGFCSRLGRNLDLSGNAGLCLN 350
              GEIP G  SL H++HLNLSRN+L GVVPF+S F  RLG+NLDLSGN GLCLN
Sbjct: 344 RLTGEIPSGFESLPHVFHLNLSRNLLIGVVPFDSSFLRRLGKNLDLSGNRGLCLN 398


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