BLASTX nr result

ID: Coptis23_contig00029118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029118
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276932.1| PREDICTED: uncharacterized protein LOC100266...   104   9e-21
ref|XP_002518977.1| transcription factor, putative [Ricinus comm...   103   1e-20
ref|XP_002326545.1| jumonji domain protein [Populus trichocarpa]...   100   2e-19
ref|XP_004148766.1| PREDICTED: uncharacterized protein LOC101211...    96   2e-18
ref|XP_003572124.1| PREDICTED: lysine-specific demethylase 5D-li...    95   5e-18

>ref|XP_002276932.1| PREDICTED: uncharacterized protein LOC100266131 [Vitis vinifera]
          Length = 884

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 5/112 (4%)
 Frame = -1

Query: 322 VEGRVCSSRETRRSLEILKCKRVRRMNPTAVPVVANARNKMTTSGGDGLKPAS-CAPRL- 149
           VEGRVC SRE +  LE L+ KR++RM         +  N MT SGGD L+P+S C  RL 
Sbjct: 10  VEGRVCLSREAKNGLEFLRHKRLQRMKSRTADQTVSVSNMMTRSGGDALRPSSSCGVRLH 69

Query: 148 --SDLGAQPSGS-PKKDDFPRGKVHKFGSADLEWTDKIPECPTYYPTKEEFE 2
             +D   + SG+  +KD F + KV KF + DLEW DKIPECP Y PTKE+FE
Sbjct: 70  GNTDSFYRSSGALNEKDAFSKRKVDKFDTTDLEWIDKIPECPVYRPTKEDFE 121


>ref|XP_002518977.1| transcription factor, putative [Ricinus communis]
           gi|223541964|gb|EEF43510.1| transcription factor,
           putative [Ricinus communis]
          Length = 780

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
 Frame = -1

Query: 325 MVEGRVCSSRETRRSLEILKCKRVRRMNPTAVPVVANARNKMTTSGGDGLKP-ASCAPRL 149
           MVEGRVC S+E R  LE LK KR++RM    +    +  + M+ SGGD L+  AS   RL
Sbjct: 1   MVEGRVCLSKEARNGLEFLKRKRLQRMKSETLTETVSVTSTMSRSGGDALRASASYGVRL 60

Query: 148 SDL--GAQPSGSPK--KDDFPRGKVHKFGSADLEWTDKIPECPTYYPTKEEFE 2
                   PS SP   KD F + KV KF ++DLEWT+KIPECP Y+PTKEEFE
Sbjct: 61  HGNVESIVPSNSPSRGKDAFAKRKVDKFDTSDLEWTEKIPECPVYHPTKEEFE 113


>ref|XP_002326545.1| jumonji domain protein [Populus trichocarpa]
           gi|222833867|gb|EEE72344.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 873

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/113 (48%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
 Frame = -1

Query: 325 MVEGRVCSSRETRRSLEILKCKRVRRMNPTAVPVVANARNKMTTSGGDGLKP-ASCAPRL 149
           MVEGRVC SRE R  LE LK +R++RM   +V    +  N M+ S GD L+  ASC  R+
Sbjct: 1   MVEGRVCLSREARNGLEYLKHRRLQRMKSESVTETVSVPNMMSRSRGDNLRASASCGVRV 60

Query: 148 ----SDLGAQPSGSPKKDDFPRGKVHKFGSADLEWTDKIPECPTYYPTKEEFE 2
                 L      S  KD F + K+ KF  ++LEWT+KIPECP Y PTKEEFE
Sbjct: 61  PGNAESLSRSAGASGGKDVFSKPKMDKFDMSNLEWTEKIPECPVYCPTKEEFE 113


>ref|XP_004148766.1| PREDICTED: uncharacterized protein LOC101211852, partial [Cucumis
           sativus]
          Length = 902

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 6/114 (5%)
 Frame = -1

Query: 325 MVEGRVCSSRETRRSLEILKCKRVRRMNPTAVPVVANARNKMTTSGGDGLKPAS-CAPRL 149
           MVEGR+CSSRE R  L +LK KR++  N       +  +N M  SGGD L+ ++ C  RL
Sbjct: 1   MVEGRICSSREDRNGLALLKLKRLQPTNSETANKTSTVKNMMNRSGGDALRASTPCGVRL 60

Query: 148 ----SDLGAQPSG-SPKKDDFPRGKVHKFGSADLEWTDKIPECPTYYPTKEEFE 2
               ++  ++ SG S ++D F + +V KF   DLEWT KIPECP Y P+KEEFE
Sbjct: 61  LGGNAETFSRSSGMSHERDVFSKRRVDKFEYDDLEWTKKIPECPVYSPSKEEFE 114


>ref|XP_003572124.1| PREDICTED: lysine-specific demethylase 5D-like [Brachypodium
           distachyon]
          Length = 867

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 54/111 (48%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
 Frame = -1

Query: 322 VEGRVCSSRETRRSLEILKCKRVRRMNPTAVPVVANARNKMTTSGGDGLK-PASCAPRL- 149
           VEGR C   E R  LE LK +R+ RM  +A     +       SGGDGL+ PA+C  RL 
Sbjct: 19  VEGRNCLPAEVRNGLETLKKRRLERMRLSAQNEAGDNPAMAARSGGDGLRSPANCGVRLH 78

Query: 148 --SDLGAQPSGSPKKDDFPRGKVHKFGSADLEWTDKIPECPTYYPTKEEFE 2
             +  G  PS S   D F + KV +F  +DLEW DKIPECP Y PTKEEFE
Sbjct: 79  ANNAAGGLPSTSSAHDHFAKRKVDRFHMSDLEWIDKIPECPVYCPTKEEFE 129


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