BLASTX nr result

ID: Coptis23_contig00029116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029116
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32687.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|XP_002315275.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>emb|CBI32687.3| unnamed protein product [Vitis vinifera]
          Length = 888

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = -1

Query: 391 FEPDKLLKTIKALASNPCAEADRVELKIAQLQLSAFNRFNCYRQ-PEFHIHGGFFEEDVN 215
           FEP +LL  +K LA + C E DR+E  I+Q QLSAF+ +  + Q PEF + GG  E+D N
Sbjct: 219 FEPAELLNYMKILAQSSCDEVDRLEFVISQAQLSAFHHWKGFSQLPEFEMLGGLLEDDEN 278

Query: 214 SFLSGDRNHSHEMID 170
             L   + H  E I+
Sbjct: 279 LPLLEAKRHFGEAIE 293


>ref|XP_002315275.1| predicted protein [Populus trichocarpa] gi|222864315|gb|EEF01446.1|
            predicted protein [Populus trichocarpa]
          Length = 1405

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
 Frame = -1

Query: 391  FEPDKLLKTIKALASNPCAEADRVELKIAQLQLSAFNRFNCYRQ-PEFHIHGGFFEE-DV 218
            F+PDKL+  +KALA +P   A+R+E  IA+ QL AF R   Y + PE+   GG  E+ D 
Sbjct: 928  FQPDKLVDYMKALAQSPSGGANRLEFVIAKSQLLAFYRLKGYSELPEYQFCGGLLEKSDA 987

Query: 217  NSFLSGDRNHSHEMIDYEAPLSDG 146
              F  G  +H+  + +    +S G
Sbjct: 988  LQFEDGSIDHTSAVYEDHGQISSG 1011


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