BLASTX nr result

ID: Coptis23_contig00029104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029104
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281519.2| PREDICTED: uncharacterized protein LOC100248...   224   1e-56
emb|CBI16203.3| unnamed protein product [Vitis vinifera]              224   1e-56
emb|CAN66786.1| hypothetical protein VITISV_037767 [Vitis vinifera]   224   1e-56
ref|XP_002276070.1| PREDICTED: uncharacterized protein LOC100241...   221   7e-56
ref|XP_002534730.1| protein binding protein, putative [Ricinus c...   212   6e-53

>ref|XP_002281519.2| PREDICTED: uncharacterized protein LOC100248374 [Vitis vinifera]
          Length = 621

 Score =  224 bits (570), Expect = 1e-56
 Identities = 104/160 (65%), Positives = 127/160 (79%)
 Frame = +1

Query: 10  YKDVSLSYLFLANNLNYVISKVRSSNLKFLLGEDWISKHELKVIQYCDNYERMGWSKVIS 189
           YKDVSLSY+FLANNL YV +KVR+SN+++LLG+DWI+KHE+KV QY  NYERMGWSKV S
Sbjct: 444 YKDVSLSYIFLANNLQYVTTKVRTSNIRYLLGDDWIAKHEIKVKQYASNYERMGWSKVFS 503

Query: 190 SIPENPTTALSLEEVKVYFQSFNSAFETAYRTQSSWVVSDGKLRDEIKLSICRKLVPAYG 369
           S+PENP+  +S E+ K  F+ FNSAFE  YR Q+SWVV D KL++EIKLSI +KL P Y 
Sbjct: 504 SLPENPSADISPEKAKECFKKFNSAFEEVYRKQTSWVVPDNKLQEEIKLSIAKKLEPTYR 563

Query: 370 ELYDKYRVMLRNERNIESLIRFTPDDLGNYLSDLFYGNGI 489
             Y+K R  LR E   ES++RF PDD+GNYLSDLFYG G+
Sbjct: 564 AFYEKNRARLRREPGSESVVRFAPDDMGNYLSDLFYGTGV 603


>emb|CBI16203.3| unnamed protein product [Vitis vinifera]
          Length = 540

 Score =  224 bits (570), Expect = 1e-56
 Identities = 104/160 (65%), Positives = 127/160 (79%)
 Frame = +1

Query: 10  YKDVSLSYLFLANNLNYVISKVRSSNLKFLLGEDWISKHELKVIQYCDNYERMGWSKVIS 189
           YKDVSLSY+FLANNL YV +KVR+SN+++LLG+DWI+KHE+KV QY  NYERMGWSKV S
Sbjct: 301 YKDVSLSYIFLANNLQYVTTKVRTSNIRYLLGDDWIAKHEIKVKQYASNYERMGWSKVFS 360

Query: 190 SIPENPTTALSLEEVKVYFQSFNSAFETAYRTQSSWVVSDGKLRDEIKLSICRKLVPAYG 369
           S+PENP+  +S E+ K  F+ FNSAFE  YR Q+SWVV D KL++EIKLSI +KL P Y 
Sbjct: 361 SLPENPSADISPEKAKECFKKFNSAFEEVYRKQTSWVVPDNKLQEEIKLSIAKKLEPTYR 420

Query: 370 ELYDKYRVMLRNERNIESLIRFTPDDLGNYLSDLFYGNGI 489
             Y+K R  LR E   ES++RF PDD+GNYLSDLFYG G+
Sbjct: 421 AFYEKNRARLRREPGSESVVRFAPDDMGNYLSDLFYGTGV 460


>emb|CAN66786.1| hypothetical protein VITISV_037767 [Vitis vinifera]
          Length = 621

 Score =  224 bits (570), Expect = 1e-56
 Identities = 104/160 (65%), Positives = 127/160 (79%)
 Frame = +1

Query: 10  YKDVSLSYLFLANNLNYVISKVRSSNLKFLLGEDWISKHELKVIQYCDNYERMGWSKVIS 189
           YKDVSLSY+FLANNL YV +KVR+SN+++LLG+DWI+KHE+KV QY  NYERMGWSKV S
Sbjct: 444 YKDVSLSYIFLANNLQYVTTKVRTSNIRYLLGDDWIAKHEIKVKQYASNYERMGWSKVFS 503

Query: 190 SIPENPTTALSLEEVKVYFQSFNSAFETAYRTQSSWVVSDGKLRDEIKLSICRKLVPAYG 369
           S+PENP+  +S E+ K  F+ FNSAFE  YR Q+SWVV D KL++EIKLSI +KL P Y 
Sbjct: 504 SLPENPSADISPEKAKECFKKFNSAFEEVYRKQTSWVVPDNKLQEEIKLSIAKKLEPTYR 563

Query: 370 ELYDKYRVMLRNERNIESLIRFTPDDLGNYLSDLFYGNGI 489
             Y+K R  LR E   ES++RF PDD+GNYLSDLFYG G+
Sbjct: 564 AFYEKNRARLRREPGSESVVRFAPDDMGNYLSDLFYGTGV 603


>ref|XP_002276070.1| PREDICTED: uncharacterized protein LOC100241639 [Vitis vinifera]
          Length = 622

 Score =  221 bits (564), Expect = 7e-56
 Identities = 109/163 (66%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   EHYKDVSLSYLFLANNLNYVISKVRSSNLKFLLGEDWISKHELKVIQYCDNYERMGWSKV 183
           E YKD+ LSYLFLANNL++V+ KVR+SNL++LLGE+WISKHE KV QY  +YE MGW+KV
Sbjct: 440 ELYKDIGLSYLFLANNLHFVLEKVRTSNLRYLLGEEWISKHEKKVKQYSASYEVMGWTKV 499

Query: 184 ISSIPENPTTA-LSLEEVKVYFQSFNSAFETAYRTQSSWVVSDGKLRDEIKLSICRKLVP 360
            SS+PEN + A +S E+VK  F  FN AFE AYR Q+SWVV DGKLRD+IK+SI +KLVP
Sbjct: 500 FSSLPENNSQAPMSPEDVKECFGRFNLAFEEAYRKQTSWVVQDGKLRDDIKVSIAKKLVP 559

Query: 361 AYGELYDKYRVMLRNERNIESLIRFTPDDLGNYLSDLFYGNGI 489
           AYGE Y+KY  ML  ERN+E L+RF+PDDLGNYLSDL +G  I
Sbjct: 560 AYGEFYEKYLGMLDGERNLEVLVRFSPDDLGNYLSDLLHGTAI 602


>ref|XP_002534730.1| protein binding protein, putative [Ricinus communis]
           gi|223524670|gb|EEF27653.1| protein binding protein,
           putative [Ricinus communis]
          Length = 630

 Score =  212 bits (539), Expect = 6e-53
 Identities = 101/160 (63%), Positives = 126/160 (78%)
 Frame = +1

Query: 4   EHYKDVSLSYLFLANNLNYVISKVRSSNLKFLLGEDWISKHELKVIQYCDNYERMGWSKV 183
           E YKDV+ SYLFLANNL YV+SKVR+S+LKFL+G+DWI KHE KV QY  NYERMGWSKV
Sbjct: 448 ELYKDVAQSYLFLANNLQYVVSKVRTSSLKFLIGDDWIRKHEAKVRQYAQNYERMGWSKV 507

Query: 184 ISSIPENPTTALSLEEVKVYFQSFNSAFETAYRTQSSWVVSDGKLRDEIKLSICRKLVPA 363
           I+S+PE+ T A+++  V   F+ FN AFE  Y+ QSSWVV D KLRDEIK+S+ RK+VP 
Sbjct: 508 IASLPEDSTAAMTVNSVAERFKRFNLAFEDTYKKQSSWVVPDAKLRDEIKVSVARKIVPV 567

Query: 364 YGELYDKYRVMLRNERNIESLIRFTPDDLGNYLSDLFYGN 483
           Y E Y+K+RV++R+      ++RF PDDL NYLSDLF+GN
Sbjct: 568 YREFYEKFRVVVRS----VGIVRFAPDDLENYLSDLFFGN 603


Top