BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029099
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...   136   2e-30
gb|AAB48346.1| reverse transcriptase, partial [Arabidopsis thali...   132   2e-29
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...   132   4e-29
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   132   4e-29
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   132   4e-29

>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/133 (50%), Positives = 90/133 (67%)
 Frame = +2

Query: 20  VQNFFRFGELHPKHNETFTSLIPKIASPNHISKYRPISLCNFTYKIISKILANRLKNHLH 199
           +Q   R   + P+ NET   LIPK+  P +I   RPISLCN  YKI+SK+LANRLK  L 
Sbjct: 165 LQAVLRGAPMPPEWNETIIVLIPKVPKPENIKDLRPISLCNVLYKIVSKVLANRLKTILP 224

Query: 200 KIISPFQCAFIKGRSIGDNVGLASKVFHNMKRMYKNKKGWVALKMDMAKAYDRVEWSFLR 379
           ++ISP Q AF+ GR I DN+ +A ++ H M+   + K G+ A+K+DM+KAYDRVEWSFLR
Sbjct: 225 EVISPTQSAFVPGRLISDNILVAYEMTHYMRSKKRGKMGYAAIKLDMSKAYDRVEWSFLR 284

Query: 380 HIFSKLRFSRKWI 418
            +   L F+ +WI
Sbjct: 285 DMMLWLGFNAEWI 297


>gb|AAB48346.1| reverse transcriptase, partial [Arabidopsis thaliana]
          Length = 199

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/134 (48%), Positives = 92/134 (68%)
 Frame = +2

Query: 17  MVQNFFRFGELHPKHNETFTSLIPKIASPNHISKYRPISLCNFTYKIISKILANRLKNHL 196
           MV++FF    +  + N+T   LIPKI  P H+S YRPISLC  +YKIISKIL  RLK  L
Sbjct: 26  MVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRPISLCTASYKIISKILIKRLKQCL 85

Query: 197 HKIISPFQCAFIKGRSIGDNVGLASKVFHNMKRMYKNKKGWVALKMDMAKAYDRVEWSFL 376
             +IS  Q AF+ GR+I DNV +A ++ H++K   + + G+VA+K D++KAYDRVEW+FL
Sbjct: 86  GDVISDSQAAFVPGRNISDNVLVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFL 145

Query: 377 RHIFSKLRFSRKWI 418
             +  +L F+ +W+
Sbjct: 146 EKVMIQLGFAPRWV 159


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/137 (46%), Positives = 95/137 (69%)
 Frame = +2

Query: 8   IVEMVQNFFRFGELHPKHNETFTSLIPKIASPNHISKYRPISLCNFTYKIISKILANRLK 187
           ++++VQNF   G    + NET   LIPK   P  ++++RPISLCN +YK+ISK+L++RLK
Sbjct: 48  LIKLVQNFHSTGFFDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSSRLK 107

Query: 188 NHLHKIISPFQCAFIKGRSIGDNVGLASKVFHNMKRMYKNKKGWVALKMDMAKAYDRVEW 367
             L ++IS  Q AF+  R I DN+ +A + FH ++     KK ++A+K DM+KAYDRVEW
Sbjct: 108 RLLPELISETQSAFVAERLITDNILIAQENFHALRTNPACKKKYMAIKTDMSKAYDRVEW 167

Query: 368 SFLRHIFSKLRFSRKWI 418
           SFLR +  K+ F++KW+
Sbjct: 168 SFLRALMLKMGFAQKWV 184


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/137 (47%), Positives = 87/137 (63%)
 Frame = +2

Query: 8    IVEMVQNFFRFGELHPKHNETFTSLIPKIASPNHISKYRPISLCNFTYKIISKILANRLK 187
            ++  V+ FF    + P  N T   +IPKI +P  +S YRPI+LCN  YK+ISK L NRLK
Sbjct: 623  VILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLK 682

Query: 188  NHLHKIISPFQCAFIKGRSIGDNVGLASKVFHNMKRMYKNKKGWVALKMDMAKAYDRVEW 367
            +HL+ I+S  Q AFI GR I DNV +A +V H++K   +  K ++A+K D++KAYDRVEW
Sbjct: 683  SHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEW 742

Query: 368  SFLRHIFSKLRFSRKWI 418
             FL        F  KWI
Sbjct: 743  DFLETTMRLFGFCNKWI 759


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/137 (46%), Positives = 95/137 (69%)
 Frame = +2

Query: 8   IVEMVQNFFRFGELHPKHNETFTSLIPKIASPNHISKYRPISLCNFTYKIISKILANRLK 187
           ++++VQNF   G    + NET   LIPK   P  ++++RPISLCN +YK+ISK+L++RLK
Sbjct: 414 LIKLVQNFHSTGFFDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSSRLK 473

Query: 188 NHLHKIISPFQCAFIKGRSIGDNVGLASKVFHNMKRMYKNKKGWVALKMDMAKAYDRVEW 367
             L ++IS  Q AF+  R I DN+ +A + FH ++     KK ++A+K DM+KAYDRVEW
Sbjct: 474 RLLPELISETQSAFVAERLITDNILIAQENFHALRTNPACKKKYMAIKTDMSKAYDRVEW 533

Query: 368 SFLRHIFSKLRFSRKWI 418
           SFLR +  K+ F++KW+
Sbjct: 534 SFLRALMLKMGFAQKWV 550